Contig 002063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004A08Sequence223002063 (3)
JMSF005A08Sequence244002063 (3)334004945 (6)ref|XP_004229646.1|5e-22PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like [Solanum lycop
JMSF005B05Sequence288002063 (3)

Alignment

This contig is upended


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JMSF005A08+                                                                   TCGT
JMSF005B05+                       CGGCGTCGCAGGCAGACAAGAACTGGTCCATGTTAGCATGCAGTTCGT
                      ____________________________________________________________
consensus                         CGGCGTCGCAGGCAGACAAGAACTGGTCCATGTTAGCATGCAGTTCGT
 
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JMSF005A08+           CGATGTTTCTGGAGGTTCTCCTCAGTGCATCCATCGCCGCCTCCGGAATCACTTGCCGGC
JMSF005B05+           CGATGTTTCTGGAGGTTCTCCTCAGTGCATCCATCGCCGCCTCCGGAATCACTTGCCGGC
JMSF004A08+                            CTCCTCAGTGCATCCATCGCCGCCTCCGGAATCACTTGCCGGC
                      ____________________________________________________________
consensus             CGATGTTTCTGGAGGTTCTCCTCAGTGCATCCATCGCCGCCTCCGGAATCACTTGCCGGC
 
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JMSF005A08+           TGCTGCCGCCGCCGCCTCTCTCCTCCGCAACTCCTTGTCCTTCCATTCCTTCGGGGATTC
JMSF005B05+           TGCTGCCGCCGCCGCCTCTCTCCTCCGCAACTCCTTGTCCTTCCATTCCTTCGGGGATTC
JMSF004A08+           TGCTGCCGCCGCCGCCTCTCTCCTCCGCAACTCCTTGTCCTTCCATTCCTTCGGGGATTC
                      ____________________________________________________________
consensus             TGCTGCCGCCGCCGCCTCTCTCCTCCGCAACTCCTTGTCCTTCCATTCCTTCGGGGATTC
 
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JMSF005A08+           TTTACCTCTCCTTAACCCGATTAGAGTGCACTCTGGCTGTTTGCAAAATTTACAGTAATG
JMSF005B05+           TTTACCTCTCCTTAACCCGATTAGAGTGCACTCTGGCTGTTTGCAAAATTTACAGTAATG
JMSF004A08+           TTTACCTCTCCTTAACCCGATTAGAGTGCACTCTGGCTGTTTGCAAAATTTACAGTAATG
                      ____________________________________________________________
consensus             TTTACCTCTCCTTAACCCGATTAGAGTGCACTCTGGCTGTTTGCAAAATTTACAGTAATG
 
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JMSF005A08+           AAATCGAATGAAGGTTTTAGGGCTTTCCGATAGGGACTACGTTGTCTACTGACGAAAGTC
JMSF005B05+           AAATCGAATGAAGGTTTTAGGGCTTTCCGATAGGGACTACGTTGTCTACTGACGAAAGTC
JMSF004A08+           AAATCGAATGAAGGTTTTAGGGCTTTCCGATAGGGACTACGTTGTCTACTGACGAAAGTC
                      ____________________________________________________________
consensus             AAATCGAATGAAGGTTTTAGGGCTTTCCGATAGGGACTACGTTGTCTACTGACGAAAGTC