| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036K14 | Sequence | 526 | 002061 (6) | ref|XP_010534569.1| | 9e-92 | PREDICTED: eukaryotic translation initiation factor 3 subunit F [Tarenaya hassl | 761 | 002061 (6) | ref|XP_010275422.1| | 4e-91 | PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Nelumbo n |
| JMFS137B07 | Sequence | 621 | 002061 (6) | ref|XP_009627880.1| | 4e-106 | PREDICTED: eukaryotic translation initiation factor 3 subunit F {ECO:0000255|HA | |||||
| JMSF003N01 | Sequence | 362 | 002061 (6) | emb|CDP14052.1| | 7e-41 | unnamed protein product [Coffea canephora] | 769 | 002061 (6) | ref|XP_006355662.1| | 5e-88 | PREDICTED: eukaryotic translation initiation factor 3 subunit F-like [Solanum t |
| JMSF006H17 | Sequence | 409 | 002061 (6) | ref|XP_009627880.1| | 2e-65 | PREDICTED: eukaryotic translation initiation factor 3 subunit F {ECO:0000255|HA | |||||
This contig is upended
. : . : . : . : . : . :
rJMSF003N01- CACACCACCTAAACTTGGTTTCAAAAATTCAAGAATGCACATGGGAGGGGAGGCTT
rJMFF036K14- AAAATTCAAGAATGCACATGGGAGGGGAGGCTT
____________________________________________________________
consensus CACACCACCTAAACTTGGTTTCAAAAATTCAAGAATGCACATGGGAGGGGAGGCTT
. : . : . : . : . : . :
rJMSF003N01- AAGAAGAATACAAGATAGAGCGAGCAACAACAGGCAGGAAATATCATCACGAAAAATTGA
rJMFF036K14- AAGAAGAATACAAGATAGAGCGAGCAACAACAGGCAGGAAATATCATCACGAAAAATTGA
____________________________________________________________
consensus AAGAAGAATACAAGATAGAGCGAGCAACAACAGGCAGGAAATATCATCACGAAAAATTGA
. : . : . : . : . : . :
rJMSF003N01- AGTATAACATTAAATTATATAATCTCAAAACTAACAGCCATAGGCTGGCCATAGATCAAT
rJMFF036K14- AGTATAACATTAAATTATATAATCTCAAAACTAACAGCCATAGGCTGGCCATAGATCAAT
____________________________________________________________
consensus AGTATAACATTAAATTATATAATCTCAAAACTAACAGCCATAGGCTGGCCATAGATCAAT
. : . : . : . : . : . :
rJMSF003N01- CGGGCACAAGAGAAGAAGCACTGCATTACAACTGGCAAGGCTTGCAAAAGGAAGGAAAGA
rJMFF036K14- CGGGCACAAGAGAAGAAGCACTGCATTACAACTGGCAAGGCTTGCAAAAGGAAGGAAAGA
____________________________________________________________
consensus CGGGCACAAGAGAAGAAGCACTGCATTACAACTGGCAAGGCTTGCAAAAGGAAGGAAAGA
. : . : . : . : . : . :
rJMSF003N01- TGAGTTACAGGATCTGAGCAGCAGTGTTCAACTTTTCAGCCAAGCTGAGTTGTGTTCTTG
rJMFF036K14- TGAGTTACAGGATCTGAGCAGCAGTGTTCAACTTTTCAGCCAAGCTGAGTTGTGTTCTTG
____________________________________________________________
consensus TGAGTTACAGGATCTGAGCAGCAGTGTTCAACTTTTCAGCCAAGCTGAGTTGTGTTCTTG
. : . : . : . : . : . :
rJMSF003N01- TGATGCTCGACAAATATAGTAGGAGCAATTGATCCTGAAGACTGTCATTCACAAGCTTAT
rJMFF036K14- TGATGCTCGACAAATATAGTAGGAGCAATTGATCCTGAAGACTGTCATTCACAAGCTTAT
____________________________________________________________
consensus TGATGCTCGACAAATATAGTAGGAGCAATTGATCCTGAAGACTGTCATTCACAAGCTTAT
. : . : . : . : . : . :
rJMSF003N01- CGAATTCTTGTGGTGATAATTTTGGAATAGAGTTTACAGTTTCAGATATAAGTCTTCCAA
rJMFF036K14- CGAATTCTTGTGGTGATAATTTTGGAATAGAGTTTACAGTTTCAGATATAAGTCTTCCAA
____________________________________________________________
consensus CGAATTCTTGTGGTGATAATTTTGGAATAGAGTTTACAGTTTCAGATATAAGTCTTCCAA
. : . : . : . : . : . :
rJMSF003N01- GGTTATTGTCCGGTGAAATGCGACCTTCCACAACATCATCAACATATTTGTGAACATCAT
rJMFF036K14- GGTTATTGTCCGGTGAAATGCGACCTTCCACAACATCATCAACATATTTGTGAACATCAT
____________________________________________________________
consensus GGTTATTGTCCGGTGAAATGCGACCTTCCACAACATCATCAACATATTTGTGAACATCAT
. : . : . : . : . : . :
rJMSF003N01- TGATCAGAGCAAGTAATCTCTCCATTGATGCCTCCATTCCTTCTAGGTCATTTGGAAGTT
rJMFF036K14- TGATCAGAGCAAGTAATCTCTCCATTGATGCCTCCATTCCTTCTAGGTCATTTGGAAGTT
____________________________________________________________
consensus TGATCAGAGCAAGTAATCTCTCCATTGATGCCTCCATTCCTTCTAGGTCATTTGGAAGTT
. : . : . : . : . : . :
rJMSF003N01- TGTCAACCACTGTTGTCTTCAGCATATCAAATCCAACCCGCTCAGCTTCAATCATTCGCA
rJMFF036K14- TGTCAACCACTGTTGTCTTCAGCATATCAAATCCAACCCGCTCAGCTTCAATCATTCGCA
JMFS137B07+ ATCAAATCCAACCCGCTCAGCTTCAATCATTCGCA
____________________________________________________________
consensus TGTCAACCACTGTTGTCTTCAGCATATCAAATCCAACCCGCTCAGCTTCAATCATTCGCA
. : . : . : . : . : . :
rJMSF003N01- AGTCCAATGGAATTTCTTGGAACTGTGCAGCAAGAGGTTGATCCCCAAGTGACAAATTCA
rJMFF036K14- AGTCCAATGGAATTTCTTGGAACTGTGCAGCAAGAGGTTGATCCCCAAGTGACAAATTCA
JMFF036K14+ AACTGTGCAGCAAGAGGTTGATCCCCAAGTGACAAATTCA
JMFS137B07+ AGTCCAATGGAATTTCTTGGAACTGTGCAGCAAGAGGTTGATCCCCAAGTGACAAATTCA
____________________________________________________________
consensus AGTCCAATGGAATTTCTTGGAACTGTGCAGCAAGAGGTTGATCCCCAAGTGACAAATTCA
. : . : . : . : . : . :
rJMSF003N01- CAGAAATGAAAGCTTTGATGGTAGCCTCCCCATTTGTGAATCCAGTGTCAACAGTCAAAT
rJMFF036K14- CAGAAATGAAAGCTTTGATGGTAGCCTCCCCATTTGTGAATCCAGTGTCAACAGTCAAAT
JMFF036K14+ CAGAAATGAAAGCTTTGATGGTAGCCTCCCCATTTGTGAATCCAGTGTCAACAGTCAAAT
JMFS137B07+ CAGAAATGAAAGCTTTGATCGTAGCCTCCCCATTTGTGAATCCAGTGTCAACAGTCAAAT
____________________________________________________________
consensus CAGAAATGAAAGCTTTGATGGTAGCCTCCCCATTTGTGAATCCAGTGTCAACAGTCAAAT
. : . : . : . : . : . :
rJMSF003N01- GAACAGGATTTGTACCTTCTCTAGAGTAAAATNCATGGATTAGAGCGCTACCG
rJMFF036K14- GAACAGGATTTGTAACTTCTCTAGAGTAAAATTCATGGATTAAAGCGCTACCG
JMFF036K14+ GAACAGGATTTGTAACTTCTCTAGAGTAAAATTCATGGATTAGAGCGCTACCGCCTGAAA
JMSF006H17+ CTCTAGAGTAAAATTCATGGATTAGAGCGCTACCGCCTGAAA
JMFS137B07+ GAACAGGATTTGTAACTTCTCTAGAGTAAAATTCATGGATTAGAGCGCTACCGCCTGAAA
____________________________________________________________
consensus GAACAGGATTTGTAACTTCTCTAGAGTAAAATTCATGGATTAGAGCGCTACCGCCTGAAA
. : . : . : . : . : . :
JMFF036K14+ CTCCAAACCCAGTAGAAAACCATCCAACAATGACTTCCTTTGGATTCACTTTCTGATGGG
JMSF006H17+ CTCCAAACCCAGTAGAAAACCATCCAACAATGACTTCCTTTGGATTCACTTTCTGATGGG
JMFS137B07+ CTCCAAACCCAGTAGAAAACCATCCAACAATGACTTCCTTTGGATTCACTTTCTGATGGG
JMSF003N01+ GG
____________________________________________________________
consensus CTCCAAACCCAGTAGAAAACCATCCAACAATGACTTCCTTTGGATTCACTTTCTGATGGG
. : . : . : . : . : . :
JMFF036K14+ ATGCCAACATGTTATGATGATAATCAATATCCAAAGCAACCTGGTCTTGGGACTCGTTGT
JMSF006H17+ ATGCCAACATGTTATGATGATAATCAATATCCAAAGCAACCTGGTCTTGGGACTCGTTGT
JMFS137B07+ ATGCCAACATGTTATGATGATAATCAATATCCAAAGCAACCTGGTCTTGGGACTCGTTGT
JMSF003N01+ ATGCCAACATGTTATGATGATAATCAATATCCAAAGCAACCTGGTCTTGGGACTCGTTGT
____________________________________________________________
consensus ATGCCAACATGTTATGATGATAATCAATATCCAAAGCAACCTGGTCTTGGGACTCGTTGT
. : . : . : . : . : . :
JMFF036K14+ GAGGAACGGCATAGGAGTTGCGAATATCGACGGTACCATCCGGTAAGACAGATCCGAGAA
JMSF006H17+ GAGGAACGGCATAGGAGTTGCGAATATCGACGGTACCATCCGGTAAGACAGATCCGAGAA
JMFS137B07+ GAGGAACGGCATAGGAGTTGCGAATATCGACGGTACCATCCGGTAAGACAGATCCGAGAA
JMSF003N01+ GAGGAACGGCATAGGAGTTGCGAATATCGACGGTACCATCCGGTAAGACAGATCCGAGAA
____________________________________________________________
consensus GAGGAACGGCATAGGAGTTGCGAATATCGACGGTACCATCCGGTAAGACAGATCCGAGAA
. : . : . : . : . : . :
JMFF036K14+ GTGTTCCAATGACACGCTCGGCTTGGTCGGGTCGCCGGACAAAGCAGTCGCATATGTTGA
JMSF006H17+ GTGTTCCAATGACACGCTCGGCTTGGTCGGGTCGCCGGACAAAGCAGTCGCATATGTTGA
JMFS137B07+ GTGTTCCAATGACACGCTCGGCTTGGTCGGGTCGCCGGACAAAGCAGTCGCATATGTTGA
JMSF003N01+ GTGTTCCAATGACACGCTCGGCTTGGTCGGGTCGCCGGACAAAGCAGTCGCATATGTTGA
____________________________________________________________
consensus GTGTTCCAATGACACGCTCGGCTTGGTCGGGTCGCCGGACAAAGCAGTCGCATATGTTGA
. : . : . : . : . : . :
JMFF036K14+ AAATCACCAGCGGGTGAACCCTAGCGGAGAGGGTTGTTGAAGAAGAAGACGAAATCTGGA
JMSF006H17+ AAATCACCAGCGGGTGAACCCTAGCGGAGAGGGTTGTTGAAGAAGAAGACGAAATCTGGA
JMFS137B07+ AAATCACCAGCGGGTGAACCCTAGCGGAGAGGGTTGTTGAAGAAGAAGACGAAATCTGGA
JMSF003N01+ AAATCACCAGCGGGTGAACCCTAGCGGAGAGGGTTGTTGAAGAAGAAGACGAAATCTGGA
____________________________________________________________
consensus AAATCACCAGCGGGTGAACCCTAGCGGAGAGGGTTGTTGAAGAAGAAGACGAAATCTGGA
. : . : . : . : . : . :
JMFF036K14+ GCACCGTTTGATCACTGGACGCCATTCTCGACCGCCGGCTGTTCGGACAGAGCTTTAGGG
JMSF006H17+ GCACCGTTTGATCACTGGACGCCATTCTCGACCGCCGGCTGTTCGGACAGAGCTTTAGGG
JMFS137B07+ GCACCGTTTGATCACTGGACGCCATTCTCGACCGCCGGCTGTTCGGACAGAGCTTTAGGG
JMSF003N01+ GCACCGTTTGATCACTGGACGCCATTCTCGACCGCCGGCTGTTCGGACAGAGCTTTAGGG
____________________________________________________________
consensus GCACCGTTTGATCACTGGACGCCATTCTCGACCGCCGGCTGTTCGGACAGAGCTTTAGGG
. : . : . : . : . : . :
JMFF036K14+ CAG
JMSF006H17+ CAG
JMFS137B07+ CAGACCGAGATGGAGAGTAACGGAGGCTAGGGTTTTGCTGATTGCT
JMSF003N01+ CAGACCGAGATGGAGAGTAACGGAGGCTAGGGTTTTGCTGATTGCTGGGAGAGACTACTC
____________________________________________________________
consensus CAGACCGAGATGGAGAGTAACGGAGGCTAGGGTTTTGCTGATTGCTGGGAGAGACTACTC