Contig 002058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS067G03Sequence612002058 (3)ref|XP_006354938.1|158PREDICTED: uncharacterized protein LOC102588271 [Solanum tuberosum]
JMSF003G24Sequence296002058 (3)754011240 (2)ref|XP_009766630.1|218PREDICTED: uncharacterized protein LOC104217966 [Nicotiana sylvestris]
JMSF037J06Sequence627002058 (3)ref|XP_006354938.1|174PREDICTED: uncharacterized protein LOC102588271 [Solanum tuberosum]770011240 (2)ref|XP_009766630.1|220PREDICTED: uncharacterized protein LOC104217966 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF037J06+                                           TTCTATCGTGATGCCTTCACTTACAAGG
                      ____________________________________________________________
consensus                                             TTCTATCGTGATGCCTTCACTTACAAGG
 
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JMSF037J06+           ATTTGTTTCAAACCAGGAATTGAAGTGTTTAACGGCAAATTGAGCGTGAGATGATGGTCT
JMFS067G03+               GTTTCAAACCAGGAATTGAAGTGTTTAACGGCAAATTGAGCGTGAGATGATGGTCT
                      ____________________________________________________________
consensus             ATTTGTTTCAAACCAGGAATTGAAGTGTTTAACGGCAAATTGAGCGTGAGATGATGGTCT
 
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JMSF037J06+           CCAGCAGCATACAATTCCAAAGGCCCTTCGATCTTAAATCCATCAAGAACAGCCTTGGAG
JMFS067G03+           CCAGCAGCATACAATTCCAAAGGCCCTTCGATCTTAAATCCATCAAGATCAGCCTTGGAG
                      ____________________________________________________________
consensus             CCAGCAGCATACAATTCCAAAGGCCCTTCGATCTTAAATCCATCAAGATCAGCCTTGGAG
 
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JMSF037J06+           CCAATCTCTTTAATCAAAGACTCAAAATCGGACCAATTCCTCTTCCCCAGTGATTCAAAC
JMFS067G03+           CCAATCTCTTTAATCAAAGACTCAAAATCGGACCAATTCCTCTTCCCCAGTGATTCAAAC
                      ____________________________________________________________
consensus             CCAATCTCTTTAATCAAAGACTCAAAATCGGACCAATTCCTCTTCCCCAGTGATTCAAAC
 
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JMSF037J06+           TTGGTCCACTGGGACACTTGATCGAACACCTTGAACACGAATTCAGTCTTCCCCAACCTA
JMFS067G03+           TTGGTCCACTGGGACACTTGATCGAACACCTTGAACACGAATTCAGTCTTCCCCAACCTA
                      ____________________________________________________________
consensus             TTGGTCCACTGGGACACTTGATCGAACACCTTGAACACGAATTCAGTCTTCCCCAACCTA
 
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JMSF037J06+           ACCCCAAACTCGTACTTCCACAATTTGCGATACTTGCCTCTCCTAGCATCCAATTTCGAC
JMFS067G03+           ACCCCAAACTCGTACTTCCACAATTTGCGATACTTGCCTCTCCTAGCATCCAATTTCGAC
                      ____________________________________________________________
consensus             ACCCCAAACTCGTACTTCCACAATTTGCGATACTTGCCTCTCCTAGCATCCAATTTCGAC
 
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JMSF037J06+           ACCCTAATGTCCTCCAAATCCCATTTCTCTCTCTTCGCTATTGCCTCCAATATATCCTTT
JMFS067G03+           ACCCTAATGTCCTCCAAATCCCATTTCTCTCTCTTCGCTATTGCCTCCAATATATCCTTT
                      ____________________________________________________________
consensus             ACCCTAATGTCCTCCAAATCCCATTTCTCTCTCTTCGCTATTGCCTCCAATATATCCTTT
 
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JMSF037J06+           AAGAAGAAGGAGGGCTGAGAAGTAGGTGACGGAGGTTGAGAGAAGAGAAAGGAGGTGGCT
JMFS067G03+           AAGAAGAAGGAGGGCTGAGAAGTAGGTGACGGAGGTTGAGAGAAGAGAAAGGAGGTGGCT
JMSF003G24+               AGAAGGAGGGCTGAGAAGTAGGTGACGGAGGTTGAGAGAAGAGAAAGGAGGTGGCT
                      ____________________________________________________________
consensus             AAGAAGAAGGAGGGCTGAGAAGTAGGTGACGGAGGTTGAGAGAAGAGAAAGGAGGTGGCT
 
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JMSF037J06+           TTGGGGTAGAGATAGTGAGAAATGTTGAAAAATCGTGTAGAAGCATCGGTGGAGGAAGTT
JMFS067G03+           TTGGGGTAGAGATAGTGAGAAATGTTGAAAAATCGTGTAGAAGCATCGGTGGAGGAAGTT
JMSF003G24+           TTGGGGTAGAGATAGTGAGAAATGTTGAAAAATCGTGTAGAAGCATCGGTGGAGGAAGTT
                      ____________________________________________________________
consensus             TTGGGGTAGAGATAGTGAGAAATGTTGAAAAATCGTGTAGAAGCATCGGTGGAGGAAGTT
 
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JMSF037J06+           AGGGTTAGAGTTTGGTAGTGTAGGACGAGAAAGAGAAAGAGGTTGAATGATCTACGGAGC
JMFS067G03+           AGGGTTAGAGTTTGGTAGTGTAGGACGAGAAAGAGAAAGAGGTTGAATGATCTACGGAGC
JMSF003G24+           AGGGTTAGAGTTTGGTAGTGTAGGACGAGAAAGAGAAAGAGGTTGAATGATCTACGGAGC
                      ____________________________________________________________
consensus             AGGGTTAGAGTTTGGTAGTGTAGGACGAGAAAGAGAAAGAGGTTGAATGATCTACGGAGC
 
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JMSF037J06+           ATCGTCGTTACTTGCTGTAATCGTCGCCGGACGCCGTCGACTATGCGTAGCGTAATCTC 
JMFS067G03+           ATCGTCGTTACTTGCTGTAATCGTCGCCGGACGCCGTCGACTATGCGTAGCGTAATCTCC
JMSF003G24+           ATCGTCGTTACTTGCTGTAATCGTCGCCGGACGCCGTCGACTATGCGTAGCGTAATCTCC
                      ____________________________________________________________
consensus             ATCGTCGTTACTTGCTGTAATCGTCGCCGGACGCCGTCGACTATGCGTAGCGTAATCTCC
 
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JMFS067G03+           AACTTTGCGGTGGCCA                                            
JMSF003G24+           AACTTTGCGGTGGCCACAACAGCGACTCTACTTTTCTTGTTTTGCGCCGGGATGAATCCA
                      ____________________________________________________________
consensus             AACTTTGCGGTGGCCACAACAGCGACTCTACTTTTCTTGTTTTGCGCCGGGATGAATCCA