Contig 002056:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014O11Sequence601002056 (6)gb|ADM33676.1|6e-59late embryogenesis abundant protein 14 [Ipomoea batatas]
JMFN015L08Sequence591002056 (6)gb|ADM33676.1|2e-88late embryogenesis abundant protein 14 [Ipomoea batatas]
JMFN028N20Sequence617002056 (6)gb|ADM33676.1|5e-89late embryogenesis abundant protein 14 [Ipomoea batatas]
JMFN031L06Sequence571002056 (6)gb|ADM33676.1|5e-90late embryogenesis abundant protein 14 [Ipomoea batatas]
JMSF003B11Sequence195002056 (6)gb|ADM33676.1|5e-07late embryogenesis abundant protein 14 [Ipomoea batatas]688002056 (6)gb|ADM33676.1|1e-89late embryogenesis abundant protein 14 [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN015L08+ GATTTGATGAAATGAAACAAGGTACATACTACATAGTGCAGAAAGCAACTTAT
rJMSF003B11- CATACTACATAGTGCAGAAAGCAACTTAT
                      ____________________________________________________________
consensus GATTTGATGAAATGAAACAAGGTACATACTACATAGTGCAGAAAGCAACTTAT
 
. : . : . : . : . : . :
JMFN015L08+ TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
JMFN028N20+ GACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
JMFN014O11+ CTGTTAATGATC
rJMSF003B11- TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
                      ____________________________________________________________
consensus TGTAAGACTACATTATTCATCATCATCCTATGACTACATATAACACCACTGTTAATGATC
 
. : . : . : . : . : . :
JMFN015L08+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN028N20+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN031L06+ AGGCAGCTTCGGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
JMFN014O11+ ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
rJMSF003B11- ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
                      ____________________________________________________________
consensus ATGTCTGTTAGGCAGCTTCTGGTTCTGATTTCTTCCAGAAATCAGAAAAGGTTGGGAGCT
 
. : . : . : . : . : . :
JMFN015L08+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN028N20+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN031L06+ GGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
JMFN014O11+ TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
rJMSF003B11- TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
                      ____________________________________________________________
consensus TGATCTCACCCGACTGAGACAGTGGGATGGTAAAGTTTCCAACGACAGGAAGATCAATGA
 
. : . : . : . : . : . :
JMFN015L08+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN028N20+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN031L06+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
JMFN014O11+ TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
rJMSF003B11- TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
                      ____________________________________________________________
consensus TTAGACCCAAATCAAGTTGATAGTCAATGTCCCAATCTCCACCAATGTCCCTCGCCAAAC
 
. : . : . : . : . : . :
JMFN015L08+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN028N20+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN031L06+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
JMFN014O11+ TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
rJMSF003B11- TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
                      ____________________________________________________________
consensus TCACCACCACACTGTGTGGCACCTTCACTGCCACATCAAGGGTGGTTGTTTCCTTTCCCG
 
. : . : . : . : . : . :
JMFN015L08+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN028N20+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN031L06+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
JMFN014O11+ TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
rJMSF003B11- TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
                      ____________________________________________________________
consensus TAATTGACCCTGGGTCTGGAATCGTGCCTGAAGCTATCACCCTGCCGGCGCTCTTGAGCT
 
. : . : . : . : . : . :
JMFN015L08+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN028N20+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN031L06+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
JMFN014O11+ CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGATCCTTA
rJMSF003B11- CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
                      ____________________________________________________________
consensus CGTATTTGATCTCGCAGATGGGAATGGAAACAGAGTAAGGGTTCTTGACGTCGA-CCTTA
 
. : . : . : . : . : . :
JMFN015L08+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN028N20+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN031L06+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMFN014O11+ GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
rJMSF003B11- GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
JMSF003B11+ TCGGCGATGCTGGCT
                      ____________________________________________________________
consensus GCTAGAAAGGAAAAACCGTCGAATCCAACACCTTTGATATCAACGTCGGCGATGCTGGCT
 
. : . : . : . : . : . :
JMFN015L08+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAG
JMFN028N20+ TCCGGTTTCTCCGTCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMFN031L06+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMFN014O11+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
rJMSF003B11- TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
JMSF003B11+ TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
                      ____________________________________________________________
consensus TCCGGTTTCTCCATCTCCGCCAGCTTTTCTCCCACGAAATTCTTAGCCTTGTCCACCAGA
 
. : . : . : . : . : . :
JMFN028N20+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMFN031L06+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMFN014O11+ TCCATTTCTCAAGCTCGAAACT-ATACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
rJMSF003B11- TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
JMSF003B11+ TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
                      ____________________________________________________________
consensus TCCATTTCTCAAGCTCGAAACTGAAACTAGAAGATCTGTATTTTGTCTCTTTATGCACGT
 
. : . : . : . : . : . :
JMFN028N20+ ACGCTAATGTATTATGTATGTCA
JMFN031L06+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAAC
JMFN014O11+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGA
rJMSF003B11- ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC
JMSF003B11+ ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC
                      ____________________________________________________________
consensus ACGCTAATGTATTATGTATGTCATGCAGTGTCACAAACACAGGGAGGGGACTTGTAAACC