Contig 002054:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS006E08Sequence567002054 (5)ref|XP_010255322.1|6e-13PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nelumbo nu
JMFS006E11Sequence565002054 (5)ref|XP_002304501.1|8e-13YODA family protein [Populus trichocarpa] gb|EEE79480.1| YODA family protein [Po
JMFS142F06Sequence620002054 (5)ref|XP_003631415.1|1e-27PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Vitis vinifera]
JMSF002P24Sequence314002054 (5)700005695 (3)
JMSF025F01Sequence671002054 (5)ref|XP_007143449.1|8e-18hypothetical protein PHAVU_007G0728000g, partial [Phaseolus vulgaris] gb|ESW1544738005695 (3)

Alignment

This contig is upended


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JMFS142F06+                    ATATTAGCTGACTTTGAAGTTTCTATTGGATNTGTGTTGAATGAAATAGAG
                      ____________________________________________________________
consensus                      ATATTAGCTGACTTTGAAGTTTCTATTGGATNTGTGTTGAATGAAATAGAG
 
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JMFS142F06+           GTTTGAACCTTCTGCTTCGCACTGGAAGGACTATTTATGGAAGTTCTACCCCCATTTTCA
                      ____________________________________________________________
consensus             GTTTGAACCTTCTGCTTCGCACTGGAAGGACTATTTATGGAAGTTCTACCCCCATTTTCA
 
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JMFS142F06+           TAATCAGAAGCTTGAGGGCTCAAAAGATGTGAATCAGTAGGATCATCAATATCACTGGAA
                      ____________________________________________________________
consensus             TAATCAGAAGCTTGAGGGCTCAAAAGATGTGAATCAGTAGGATCATCAATATCACTGGAA
 
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JMFS142F06+           CTGTCACAGGAAGCAGTAGCAGTTGGCAAGTCCCTATCAATATCCATAGCATCTTGTCCA
                      ____________________________________________________________
consensus             CTGTCACAGGAAGCAGTAGCAGTTGGCAAGTCCCTATCAATATCCATAGCATCTTGTCCA
 
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JMFS142F06+           TGTAGCTCAAGTCTTGGCTCAGGAAGAGGTAAGGTCAACAATGGTTTGAAGGCATACTCA
JMSF025F01+                                 GAAGAGGTAAGGTCAACAATGGTTTGAAGGCATACTCA
                      ____________________________________________________________
consensus             TGTAGCTCAAGTCTTGGCTCAGGAAGAGGTAAGGTCAACAATGGTTTGAAGGCATACTCA
 
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JMFS142F06+           GTTGCTGATTTTGCTGATACATTACTTTCAGGTTCACCATGTTGGATATTAGAAAGGTGA
JMSF025F01+           GTTGCTGATTTTGCTGATACATTACTTTCAGGTTCACCATGTTGGATATTAGAAAGGTGA
                      ____________________________________________________________
consensus             GTTGCTGATTTTGCTGATACATTACTTTCAGGTTCACCATGTTGGATATTAGAAAGGTGA
 
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JMFS142F06+           ACCACAGGAAGTGGAAGTGGTTGAGCACAGGGCCTGACCGGCCTGTCTACAAAGCTCTGA
JMSF025F01+           ACCACAGGAAGTGGAAGTGGTTGAGCACAGGGCCTGACCGGCCTGTCTACAAAGCTCTGA
JMFS006E08+                     GTGGAAGTGGTTGAGCACAGGGCCTGACCGGCCTGTCTACAAAGCTCTGA
JMFS006E11+                              GTTGAGCACAGGGCCTGACCGGCCTGTCTACAAAGCTCTGA
                      ____________________________________________________________
consensus             ACCACAGGAAGTGGAAGTGGTTGAGCACAGGGCCTGACCGGCCTGTCTACAAAGCTCTGA
 
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JMFS142F06+           CAACGTGATACTGGTATTGACGTGGATGGGGATGGTGACCTAGAATGCACTCTTGTTCGA
JMSF025F01+           CAACGTGATACTGGTATTGACGTGGATGGGGATGGTGACCTAGAATGCACTCTTGTTCGA
JMFS006E08+           CAACGTGATACTGGTATTGACGTGGATGGGGATGGTGACCTAGAATGCACTCTTGTTCGA
JMFS006E11+           CAACGTGATACTGGTATTGACGTGGATGGGGATGGTGACCTAGAATGCACTCTTGTTCGA
                      ____________________________________________________________
consensus             CAACGTGATACTGGTATTGACGTGGATGGGGATGGTGACCTAGAATGCACTCTTGTTCGA
 
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JMFS142F06+           GAGCCCTTCTCTGAAATATTGTCGCTACGACATCTTTGAGATGATCGTGACTTACCACTG
JMSF025F01+           GAGCCCTTCTCTGAAATATTGTCGCTACGACATCTTTGAGATGATCGTGACTTACCACTG
JMFS006E08+           GAGCCCTTCTCTGAAATATTGTCGCTACGACATCTTTGAGATGATCGTGACTTACCACTG
JMFS006E11+           GAGCCCTTCTCTGAAATATTGTCGCTACGACATCTTTGAGATGATCGTGACTTACCACTG
                      ____________________________________________________________
consensus             GAGCCCTTCTCTGAAATATTGTCGCTACGACATCTTTGAGATGATCGTGACTTACCACTG
 
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JMFS142F06+           GATTTTTCTAAAAAGCCAATCTTGAATTTCCTATTTATTGTATCGATGAAACTTTCCGTA
JMSF025F01+           GATTTTTCTAAAAAGCCAATCTTGAATTTCCTATTTATTGTATCGATGAAACTTTCCGTA
JMFS006E08+           GATTTTTCTAAAAAGCCAATCTTGAATTTCCTATTTATTGTATCGATGAAACTTTCCGTA
JMFS006E11+           GATTTTTCTAAAAAGCCAATCTTGAATTTCCTATTTATTGTATCGATGAAACTTTCCGTA
                      ____________________________________________________________
consensus             GATTTTTCTAAAAAGCCAATCTTGAATTTCCTATTTATTGTATCGATGAAACTTTCCGTA
 
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JMFS142F06+           GTTTTCTTCTTCTCTTCTTTTGATGAAGA                               
JMSF025F01+           GTTTTCTTCTTCTCTTCTTTTGATGAAGACCATCCCCACCAGGATCGCATGGTTATGAGA
JMFS006E08+           GTTTTCTTCTTCTCTTCTTTTGATGAAGACCATCCCCACCAGGATCGCATGGTTATGAGA
JMFS006E11+           GTTTTCTTCTTCTCTTCTTTTGATGAAGACCATCCCCACCAGGATCGCATGGTTATGAGA
JMSF002P24+                                                         GCATGGTTATGAGA
                      ____________________________________________________________
consensus             GTTTTCTTCTTCTCTTCTTTTGATGAAGACCATCCCCACCAGGATCGCATGGTTATGAGA
 
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JMSF025F01+           AAATCTAAATGGAACTGACAAAAGTCAATCTTTATTGTGAAATATTACGGCTTAATCTCT
JMFS006E08+           AAATCTAAATGGAACTGACAAAAGTCAATCTTTATTGTGAAATATTACGGCTTAATCTCT
JMFS006E11+           AAATCTAAATGGAACTGACAAAAGTCAATCTTTATTGTGAAATATTACGGCTTAATCTCT
JMSF002P24+           AAATCTAAATGGAACTGACAAAAGTCAATCTTTATTGTGAAATATTACGGCTTAATCTCT
                      ____________________________________________________________
consensus             AAATCTAAATGGAACTGACAAAAGTCAATCTTTATTGTGAAATATTACGGCTTAATCTCT
 
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JMSF025F01+           GCCGATAGATACAAACTTCTTGGAGCTAATATAATGAGATCAGTACCAACAAGCTTTACA
JMFS006E08+           GCCGATAGATACAAACTTCTTGGAGCTAATATAATGAGATCAGTACCAACAAGCTTTACA
JMFS006E11+           GCCGATAGATACAAACTTCTTGGAGCTAATATAATGAGATCAGTACCAACAAGCTTTACA
JMSF002P24+           GCCGATAGATACAAACTTCTTGGAGCTAATATAATGAGATCAGTACCAACAAGCTTTACA
                      ____________________________________________________________
consensus             GCCGATAGATACAAACTTCTTGGAGCTAATATAATGAGATCAGTACCAACAAGCTTTACA
 
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JMSF025F01+           TAGTTTACTCATTAGAGTGGCACAAAATTATCCAGCTAAGCATGTTGGCAGCAACTGATC
JMFS006E08+           TAGTTTACTCATTAGAGTGGCACAAAATTATCCAGCTAAGCATGTTGGCAGCAACTGATC
JMFS006E11+           TAGTTTACTCATTAGAGTGGCACAAAATTATCCAGCTAAGCATGTTGGCAGCAACTGATC
JMSF002P24+           TAGTTTACTCATTAGAGTGGCACAAAATTATCCAGCTAAGCATGTTGGCAGCAACTGATC
                      ____________________________________________________________
consensus             TAGTTTACTCATTAGAGTGGCACAAAATTATCCAGCTAAGCATGTTGGCAGCAACTGATC
 
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JMSF025F01+           TGCAGTGCAAAAAGCTCTGTATACCTGCAGCCCAGGGATTAGCAGATAACCGGAGCTGAC
JMFS006E08+           TGCAGTGCAAAAAGCTCTGTATACCTGCAGCCCAGGGATTAGCAGATAACCGGAGCTGAC
JMFS006E11+           TGCAGTGCAAAAAGCTCTGTATACCTGCAGCCCAGGGATTAGCAGATAACCGGAGCTGAC
JMSF002P24+           TGCAGTGCAAAAAGCTCTGTATACCTGCAGCCCAGGGATTAGCAGATAACCGGAGCTGAC
                      ____________________________________________________________
consensus             TGCAGTGCAAAAAGCTCTGTATACCTGCAGCCCAGGGATTAGCAGATAACCGGAGCTGAC
 
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JMSF025F01+           ACAACCGAAATGAACGAATGTGCTCCACTAC                             
JMFS006E08+           ACAACCGAAATGAACGAATGTGCTCCACTAC                             
JMFS006E11+           ACAACCGAAATGAACGAATGTGCTCCACTACAGCTTC                       
JMSF002P24+           ACAACCGAAATGAACGAATGTGCTCCACTACAGCTTCAGTTACTGAGAAGATGGAAGTTC
                      ____________________________________________________________
consensus             ACAACCGAAATGAACGAATGTGCTCCACTACAGCTTCAGTTACTGAGAAGATGGAAGTTC