Contig 002052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002M02Sequence366002052 (2)708008982 (5)ref|XP_009777618.1|4e-61PREDICTED: probable histone-arginine methyltransferase 1.3 [Nicotiana sylvestri
JMSF051L08Sequence724002052 (2)ref|XP_009630324.1|2e-55PREDICTED: probable histone-arginine methyltransferase 1.3 isoform X3 [Nicotian623008982 (5)ref|XP_009779154.1|1e-58PREDICTED: probable histone-arginine methyltransferase 1.3 isoform X1 [Nicotian

Alignment

This contig is upended


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JMSF051L08+                                                           CTGTCCTCACAT
                      ____________________________________________________________
consensus                                                             CTGTCCTCACAT
 
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JMSF051L08+           AGTCCTGCAACATATTCTGCTGATGCAAAAGCTGTCCATAATAATGGAAGTACATTTTGG
                      ____________________________________________________________
consensus             AGTCCTGCAACATATTCTGCTGATGCAAAAGCTGTCCATAATAATGGAAGTACATTTTGG
 
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JMSF051L08+           CAGAAGATGCCTCAATTTTGTCATCAAATTTGCTGTTTGAAGTTTGCAATGCTCCATTTT
                      ____________________________________________________________
consensus             CAGAAGATGCCTCAATTTTGTCATCAAATTTGCTGTTTGAAGTTTGCAATGCTCCATTTT
 
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JMSF051L08+           GCAAATGTGCTCCTTGTACAACCACTTGCTTTCTCCAATGTTCAAAGGCGCAATAGAAGG
                      ____________________________________________________________
consensus             GCAAATGTGCTCCTTGTACAACCACTTGCTTTCTCCAATGTTCAAAGGCGCAATAGAAGG
 
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JMSF051L08+           CACTACTTTCCTTCTCCTTTGTAAATTGAATGGTAACTCCCCTTGAACAGGTCTCTTTGC
                      ____________________________________________________________
consensus             CACTACTTTCCTTCTCCTTTGTAAATTGAATGGTAACTCCCCTTGAACAGGTCTCTTTGC
 
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JMSF051L08+           TGGTTTCAGAAGCTTCAGATACACAGAGCAATTGAACAGGGCTTAACCTAAACAGTTGAG
                      ____________________________________________________________
consensus             TGGTTTCAGAAGCTTCAGATACACAGAGCAATTGAACAGGGCTTAACCTAAACAGTTGAG
 
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JMSF051L08+           AAGTTCGGAGATCAAACACAATCCCTTTATCCGGCTCAGATTCTCCCCCAAATCGAAGCT
JMSF002M02+                                                                 GAAGCT
                      ____________________________________________________________
consensus             AAGTTCGGAGATCAAACACAATCCCTTTATCCGGCTCAGATTCTCCCCCAAATCGAAGCT
 
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JMSF051L08+           CGGCAACTCCGGAATCCAAGCCGAACCGAGCTAAAACCCGCTGCGAACCGGAAACGGAAG
JMSF002M02+           CGGCAACTCCGGAATCCAAGCCGAACCGAGCTAAAACCCGCTGCGAACCGGAAACGGAAG
                      ____________________________________________________________
consensus             CGGCAACTCCGGAATCCAAGCCGAACCGAGCTAAAACCCGCTGCGAACCGGAAACGGAAG
 
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JMSF051L08+           CCGAATCTGCAGAAGAAGAAGAAGACAACGACGAAAGCTCCGAAATAGACGCAACAAAAA
JMSF002M02+           CCGAATCTGCAGAAGAAGAAGAAGACGACGACGAAAGCTCCGAAATAGACGCAACAAAAA
                      ____________________________________________________________
consensus             CCGAATCTGCAGAAGAAGAAGAAGACGACGACGAAAGCTCCGAAATAGACGCAACAAAAA
 
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JMSF051L08+           ACTCCTGCCCTTCCTGCTTTTCTCCTATTTGAATCTCCATTTCTCGCTGACTTCAAGCTC
JMSF002M02+           ACTCCTGCCCTTCCTGCTTTTCTCCTATTTGAATCTCCATTTCTCGCTGACTTCAAGCTC
                      ____________________________________________________________
consensus             ACTCCTGCCCTTCCTGCTTTTCTCCTATTTGAATCTCCATTTCTCGCTGACTTCAAGCTC
 
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JMSF051L08+           TCAGAGGCCTCTGATCAAAAGAATATTAATCGTATTCTGTTGCACAGAGTTACGGAGAGG
JMSF002M02+           TCAGAGGCCTCTGATCAAAAGAATATTAATCGTATTCTGTTGCACAGAGTTACGGAGAGG
                      ____________________________________________________________
consensus             TCAGAGGCCTCTGATCAAAAGAATATTAATCGTATTCTGTTGCACAGAGTTACGGAGAGG
 
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JMSF051L08+           AATAGTTATACGTAAGCGTATGAATATGGTTAAGAATCCATGGGAGAAAAGGCGAGAATT
JMSF002M02+           AATAGTTATACGTAAGCGTATGAATATGGTTAAGAATCCATGGGAGAAAAGGCGAGAATT
                      ____________________________________________________________
consensus             AATAGTTATACGTAAGCGTATGAATATGGTTAAGAATCCATGGGAGAAAAGGCGAGAATT
 
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JMSF051L08+           TAGGGTTTTGAGTGGGGGAGAGAGTCACAGTGACGAGCGGGGGAGAAGAGT         
JMSF002M02+           TAGGGTTTTGAGTGGGGGAGAGAGTCACAGTGACGAGCGGGGGAGAAGAGTAAAGAGCCC
                      ____________________________________________________________
consensus             TAGGGTTTTGAGTGGGGGAGAGAGTCACAGTGACGAGCGGGGGAGAAGAGTAAAGAGCCC