Contig 002050:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+                  GATGCATGCGCCATTTCTGTTCTCTAATGGAGACAATCTTCGCTCTCCTGGAG
                      ____________________________________________________________
consensus                    GATGCATGCGCCATTTCTGTTCTCTAATGGAGACAATCTTCGCTCTCCTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           TTGGGCTGGGAATGGATGAAATGGACTGTGTAACAGAAGTTGGAGATAATTCCAACACAG
                      ____________________________________________________________
consensus             TTGGGCTGGGAATGGATGAAATGGACTGTGTAACAGAAGTTGGAGATAATTCCAACACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           ATGGATCATCAGCAGACTGCAGTTGGTTCCGCCTTTGAGCTTGAACAGTTGAAGCTTTCT
                      ____________________________________________________________
consensus             ATGGATCATCAGCAGACTGCAGTTGGTTCCGCCTTTGAGCTTGAACAGTTGAAGCTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           GGTTAGAAATGCCAACCTCATCCTTGATTTCCTTCAGGAATTCGGTCGGGTGCAAGCTAT
JMSF005H13+                                                  ATTCGGTCGGGTGCAAGCTAT
JMSF002J01+                                                  ATTCGGTCGGGTGCAAGCTAT
                      ____________________________________________________________
consensus             GGTTAGAAATGCCAACCTCATCCTTGATTTCCTTCAGGAATTCGGTCGGGTGCAAGCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           ACTCGATTGGAA---CAGAGAGCACGTGCGAGGAGGAGGAAGCAAGGGAATCCGGTCGGC
JMSF005H13+           ACTCGATTGGAACTTCAGAGAGCACGTGCGAGGAGGAGGAAGCAAGGGAATCCGGTCGGC
JMSF002J01+           ACTCGATTGGAACTTCAGAGAGCACGTGCGAGGAGGAGGAAGCAAGGGAATCCGGTCGGC
                      ____________________________________________________________
consensus             ACTCGATTGGAACTTCAGAGAGCACGTGCGAGGAGGAGGAAGCAAGGGAATCCGGTCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           TAGCACTCTTATTCAACTGTATGGAAGGCGAGTCCACCGTATCTAGGGTTTCTTCGGAGT
JMSF005H13+           TAGCACTCTTATTCAACTGTATGGAAGGCGAGTCCACCGTATCTAGGGTTTCTTCGGAGT
JMSF002J01+           TAGCACTCTTATTCAACTGTATGGAAGGCGAGTCCACCGTATCTAGGGTTTCTTCGGAGT
                      ____________________________________________________________
consensus             TAGCACTCTTATTCAACTGTATGGAAGGCGAGTCCACCGTATCTAGGGTTTCTTCGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           CAGAACCTCCCACTTCAGCTTCTTCTGAAGTCTCAGTTCCAGTCGTCGCTCCACTAGGCT
JMSF005H13+           CAGAACCTCCCACTTCAGCTTCTTCTGAAGTCTCAGTTCCAGTCGTCGCTCCACTAGGCT
JMSF002J01+           CAGAACCTCCCACTTCAGCTTCTTCTGAAGTCTCAGTTCCAGTCGTCGCTCCACTAGGCT
                      ____________________________________________________________
consensus             CAGAACCTCCCACTTCAGCTTCTTCTGAAGTCTCAGTTCCAGTCGTCGCTCCACTAGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           CATCACCACCGCCAACTCCGCCGCCGCTGTCGGCGCATGTATTTTGGAGCTGCAGAGATG
JMSF005H13+           CATCACCACCGCCAACTCCGCCGCCGCTGTCGGCGCATGTATTTTGGAGCTGCAGAGATG
JMSF002J01+           CATCACCACCGCCAACTCCGCCGCCGCTGTCGGCGCATGTATTTTGGAGCTGCAGAGATG
                      ____________________________________________________________
consensus             CATCACCACCGCCAACTCCGCCGCCGCTGTCGGCGCATGTATTTTGGAGCTGCAGAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           GCTTAGACGCTTCTCCGGTGTCATCCATGGCGGATTCCCGAGCCCCAACAATGCACTTTC
JMSF005H13+           GCTTAGACGCTTCTCCGGTGTCATCCATGGCGGATTCCCGAGCCCCAACAATGCACTTTC
JMSF002J01+           GCTTAGACGCTTCTCCGGTGTCATCCATGGCGGATTCCCGAGCCCCAACAATGCACTTTC
                      ____________________________________________________________
consensus             GCTTAGACGCTTCTCCGGTGTCATCCATGGCGGATTCCCGAGCCCCAACAATGCACTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043B12+           TGCGTGCAGAGAATAGAGAGAGAGAGAAGGTAAAGGTATTTCGAATAGTTCTGTT     
JMSF005H13+           TGCGTGCAGAGAATAGAGAGAGAGAGAAGGTAAAGGTATTTCGAATAGTTCTGTT     
JMSF002J01+           TGCGTGCAGAGAATAGAGAGAGAGAGAAGGTAAAGGTATTTCGAATAGTTCTGTTGGCTC
                      ____________________________________________________________
consensus             TGCGTGCAGAGAATAGAGAGAGAGAGAAGGTAAAGGTATTTCGAATAGTTCTGTTGGCTC