Contig 002049:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002H08Sequence356002049 (3)ref|XP_009802572.1|1e-05PREDICTED: endoglucanase 24-like [Nicotiana sylvestris]686002886 (3)emb|CDO96993.1|4e-89unnamed protein product [Coffea canephora]
JMSF028G06Sequence679002049 (3)emb|CDO96993.1|6e-94unnamed protein product [Coffea canephora]759002886 (3)emb|CDO96993.1|2e-105unnamed protein product [Coffea canephora]
JMSF047N14Sequence680002049 (3)emb|CDO96993.1|1e-103unnamed protein product [Coffea canephora]767002886 (3)ref|XP_009631305.1|5e-108PREDICTED: endoglucanase 24-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF047N14+                                                        GCTCCCCGATAGGAA
                      ____________________________________________________________
consensus                                                          GCTCCCCGATAGGAA
 
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JMSF047N14+           TCTGCGAAACTGAACACCCGTGTTGCGGTTTGCAACAGAGTATCAGCATATCCGGAATCG
JMSF028G06+                                            AACAGAGTATCAGCATATCCGGAATCG
                      ____________________________________________________________
consensus             TCTGCGAAACTGAACACCCGTGTTGCGGTTTGCAACAGAGTATCAGCATATCCGGAATCG
 
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JMSF047N14+           GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
JMSF028G06+           GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
                      ____________________________________________________________
consensus             GAAGATCGGAATGCCATGGATGAAGCGGCCAAAGCAGCCGCTGTCTCTCCGGCGACGTCG
 
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JMSF047N14+           GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
JMSF028G06+           GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
                      ____________________________________________________________
consensus             GATGCCGGATTCGGGGCATCCACGGCGTACACCGTCCGAGCTGTATCCATATCTTCCGGC
 
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JMSF047N14+           CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
JMSF028G06+           CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
                      ____________________________________________________________
consensus             CTTTCCCAACAACTATGGTCCGATATGGGATCACCAACCTGAACGAAAATGCGGTTGGGT
 
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JMSF047N14+           TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
JMSF028G06+           TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
                      ____________________________________________________________
consensus             TGGGAAACAGTTTTGAGGAGATAATCGGTGGCCCATTTAATGGCGACCAACGTATTCTGC
 
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JMSF047N14+           AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
JMSF028G06+           AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
                      ____________________________________________________________
consensus             AACTCCGACGCCGGCATGTACTGACCAAATTCGATCACGCTCCACGCGAGCATTGTGGTG
 
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JMSF047N14+           GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
JMSF028G06+           GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
                      ____________________________________________________________
consensus             GTGAAGGCCATCGGGAAACCAAACTTGACGTTATCGCCGGCGTCGTAGTAGCCGCCGGTG
 
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JMSF047N14+           AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
JMSF028G06+           AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
                      ____________________________________________________________
consensus             AGGTCTGTGTTGAACGACCACCCATCGCCCAGCCCGGAATGCCCCCGCCAGGTCATCCTC
 
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JMSF047N14+           TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
JMSF028G06+           TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
JMSF002H08+               CCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
                      ____________________________________________________________
consensus             TGCTCCGACGGCAAGTAGCCGGAACGCTGACCCTCGAAGAACAGTATGCACTTGGACAAT
 
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JMSF047N14+           GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
JMSF028G06+           GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
JMSF002H08+           GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
                      ____________________________________________________________
consensus             GCGTCGGGGTAGTTATGGTAACTGGATTGCGTAACGTCGAGAAGCAAAGTTGTGAAGAAG
 
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JMSF047N14+           AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
JMSF028G06+           AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
JMSF002H08+           AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
                      ____________________________________________________________
consensus             AAAAGAATGAGAAAACGAAAAGACATAATTAGCTTCATCGCTGGGTGATTGGGCGGGTAG
 
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JMSF047N14+           CG                                                          
JMSF028G06+           CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAAC          
JMSF002H08+           CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAACTGTTTTCTTT
                      ____________________________________________________________
consensus             CGATGAGCTATAGCGGTGAGTATACTATATATCAAGGATATAGTGAAAACTGTTTTCTTT
 
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JMSF002H08+           TAATTTTTAATTGGTTATGTTTATGTGGAGATATGAAAGGTTTCACGGGAGAGAGGAGAC
                      ____________________________________________________________
consensus             TAATTTTTAATTGGTTATGTTTATGTGGAGATATGAAAGGTTTCACGGGAGAGAGGAGAC
 
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JMSF002H08+           ACGAGAGGGGATAGGGAGAGGGAGCGAATAATCGCCGACACGCGAGTCAGTTAAAATTCC
                      ____________________________________________________________
consensus             ACGAGAGGGGATAGGGAGAGGGAGCGAATAATCGCCGACACGCGAGTCAGTTAAAATTCC