clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF048M05 | Sequence | 405 | 002044 (6) | gb|EYU27199.1| | 2e-58 | hypothetical protein MIMGU_mgv1a0226972mg, partial [Erythranthe guttata] | 457 | 013843 (6) | ref|XP_009802728.1| | 5e-34 | PREDICTED: glutamine-dependent NAD(+) synthetase-like [Nicotiana sylvestris] |
JMSF001L19 | Sequence | 252 | 002044 (6) | gb|EYU27199.1| | 1e-36 | hypothetical protein MIMGU_mgv1a0226972mg, partial [Erythranthe guttata] | 768 | 013843 (6) | ref|XP_009593822.1| | 5e-113 | PREDICTED: glutamine-dependent NAD(+) synthetase [Nicotiana tomentosiformis] |
JMSF039I11 | Sequence | 658 | 002044 (6) | ref|XP_008351125.1| | 1e-132 | PREDICTED: glutamine-dependent NAD(+) synthetase-like [Malus domestica] | 851 | 013843 (6) | ref|XP_009593822.1| | 3e-131 | PREDICTED: glutamine-dependent NAD(+) synthetase [Nicotiana tomentosiformis] |
JMSF041J04 | Sequence | 802 | 002044 (6) | gb|EYU33500.1| | 1e-168 | hypothetical protein MIMGU_mgv1a0019881mg, partial [Erythranthe guttata] | 805 | 013843 (6) | ref|XP_009593822.1| | 8e-129 | PREDICTED: glutamine-dependent NAD(+) synthetase [Nicotiana tomentosiformis] |
JMSF046P13 | Sequence | 713 | 002044 (6) | ref|XP_008351125.1| | 6e-144 | PREDICTED: glutamine-dependent NAD(+) synthetase-like [Malus domestica] | 558 | 013843 (6) | ref|XP_009593822.1| | 3e-82 | PREDICTED: glutamine-dependent NAD(+) synthetase [Nicotiana tomentosiformis] |
JMSF052L13 | Sequence | 620 | 002044 (6) | ref|XP_008351125.1| | 2e-131 | PREDICTED: glutamine-dependent NAD(+) synthetase-like [Malus domestica] | 953 | 013843 (6) | ref|XP_009593822.1| | 2e-144 | PREDICTED: glutamine-dependent NAD(+) synthetase [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF041J04+ TCCATTGACAACCACACAAGAACATC
____________________________________________________________
consensus TCCATTGACAACCACACAAGAACATC
. : . : . : . : . : . :
JMSF041J04+ CATCAAAATAAAGCCGACCACCATCACATCCTTGTTGATTGCTGTACATGTACACTCCTC
____________________________________________________________
consensus CATCAAAATAAAGCCGACCACCATCACATCCTTGTTGATTGCTGTACATGTACACTCCTC
. : . : . : . : . : . :
JMSF041J04+ CCCGTGTGTGTGTGGCACTTATGAAAGCACGAATGCGAAGATCAAGCTTTCTTAATTGAT
JMSF046P13+ GTGTGTGTGTGGCACTTATGAAAGCACGAATGCGAAGATCAAGCTTTCTTAATTGAT
JMSF052L13+ T
JMSF039I11+ T
____________________________________________________________
consensus CCCGTGTGTGTGTGGCACTTATGAAAGCACGAATGCGAAGATCAAGCTTTCTTAATTGAT
. : . : . : . : . : . :
JMSF041J04+ GATGGCTTCCACTTGCATTCATAAACACTTCAACGCCATTCAATGCAAGTTCACCATGGG
JMSF046P13+ GATGGCTTCCACTTGCATTCATAAACACTTCAACGCCATTCAATGCAAGTTCACCATGGG
JMSF052L13+ GATGGCTTCCACTTGCATTCATAAACACTTCAACGCCATTCAATGCAAGTTCACCATGGG
JMSF039I11+ GATGGCTTCCACTTGCATTCATAAACACTTCAACGCCATTCAATGCAAGTTCACCATGGG
____________________________________________________________
consensus GATGGCTTCCACTTGCATTCATAAACACTTCAACGCCATTCAATGCAAGTTCACCATGGG
. : . : . : . : . : . :
JMSF041J04+ GTGGTGAAGGTACAAAAAGTTCCTCACAAACTTCAGCTGCAACAGCTGTGTCTAAAAACT
JMSF046P13+ GTGGTGAAGGTACAAAAAGTTCCTCACAAACTTCAGCTGCAACAGCTGTGTCTAAAAACT
JMSF052L13+ GTGGTGAAGGTACAAAAAGTTCCTCACAAACTTCAGCTGCAACAGCTGTGTCTAAAAACT
JMSF039I11+ GTGGTGAAGGTACAAAAAGTTCCTCACAAACTTCAGCTGCAACAGCTGTGTCTAAAAACT
____________________________________________________________
consensus GTGGTGAAGGTACAAAAAGTTCCTCACAAACTTCAGCTGCAACAGCTGTGTCTAAAAACT
. : . : . : . : . : . :
JMSF041J04+ GGATATAGCCATAGCCAAATGGCACAGTTGTCTGAGACAAAGCTTCAGAAATTTCACTTG
JMSF046P13+ GGATATAGCCATAGCCAAATGGCACAGTTGTCTGAGACAAAGCTTCAGAAATTTCACTTG
JMSF052L13+ GGATATAGCCATAGCCAAATGGCACAGTTGTCTGAGACAAAGCTTCAGAAATTTCACTTG
JMSF039I11+ GGATATAGCCATAGCCAAATGGCACAGTTGTCTGAGACAAAGCTTCAGAAATTTCACTTG
____________________________________________________________
consensus GGATATAGCCATAGCCAAATGGCACAGTTGTCTGAGACAAAGCTTCAGAAATTTCACTTG
. : . : . : . : . : . :
JMSF041J04+ GGAGCTGAAAATCCTCAAGATCTCTTCTCTTCCATGCCGTAAACCATCGAAGTTCCCTGT
JMSF046P13+ GGAGCTGAAAATCCTCAAGATCTCTTCTCTTCCATGCCGTAAACCATCGAAGTTCCCTGT
JMSF052L13+ GGAGCTGAAAATCCTCAAGATCTCTTCTCTTCCATGCCGTAAACCATCGAAGTTCCCTGT
JMSF039I11+ GGAGCTGAAAATCCTCAAGATCTCTTCTCTTCCATGCCGTAAACCATCGAAGTTCCCTGT
____________________________________________________________
consensus GGAGCTGAAAATCCTCAAGATCTCTTCTCTTCCATGCCGTAAACCATCGAAGTTCCCTGT
. : . : . : . : . : . :
JMSF041J04+ AGTTTCCATCATTTGCTAGCCACATCTTGGGTCGTATCATTAATATTTTCCTGTTAAGAC
JMSF046P13+ AGTTTCCATCATTTGCTAGCCACATCTTGGGTCGTATCATTAATATTTTCCTGTTAAGAC
JMSF052L13+ AGTTTCCATCATTTGCTAGCCACATCTTGGGTCGTATCATTAATATTTTCCTGTTAAGAC
JMFF048M05+ GTATCATTAATATTTTCCTGTTAAGAC
JMSF039I11+ AGTTTCCATCATTTGCTAGCCACATCTTGGGTCGTATCATTAATATTTTCCTGTTAAGAC
____________________________________________________________
consensus AGTTTCCATCATTTGCTAGCCACATCTTGGGTCGTATCATTAATATTTTCCTGTTAAGAC
. : . : . : . : . : . :
JMSF041J04+ AAAATACTTGACA-GTTGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
JMSF046P13+ AAAATACTTGACA-GTTGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
JMSF052L13+ AAAATACTTGACA-GTTGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
JMFF048M05+ AAAATACTTGACAGGTGGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
JMSF039I11+ AAAATACTTGACA-GTTGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
____________________________________________________________
consensus AAAATACTTGACA-GTTGTAATGCTCTGACCCTTTGACAACAGGCATTCCAAAACTACAC
. : . : . : . : . : . :
JMSF041J04+ AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
JMSF046P13+ AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
JMSF052L13+ AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
JMFF048M05+ AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
JMSF039I11+ AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
JMSF001L19+ CACGCATGAGAG
____________________________________________________________
consensus AATATGCCATCTGTCCAATCACCTAGTAGTAATTCTTTTAAGCACTCCCACGCATGAGAG
. : . : . : . : . : . :
JMSF041J04+ ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
JMSF046P13+ ACGGTGTAGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
JMSF052L13+ ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
JMFF048M05+ ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
JMSF039I11+ ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
JMSF001L19+ ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
____________________________________________________________
consensus ACGGTGTCGAGTTCGAGGAAATGATCCTCGCAGCCATAGCCAGTGATTTCGAGCTCGGGG
. : . : . : . : . : . :
JMSF041J04+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
JMSF046P13+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
JMSF052L13+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
JMFF048M05+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATGGAATCCTTTATGTTCTTC
JMSF039I11+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
JMSF001L19+ CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
____________________________________________________________
consensus CCGAGCCTGATCACAGCTCCCGCCGCTTTAGCCCTAGAAATCGAATCCTTTATGTTCTTC
. : . : . : . : . : . :
JMSF041J04+ ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
JMSF046P13+ ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
JMSF052L13+ ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
JMFF048M05+ ATATTGCAGTGGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
JMSF039I11+ ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
JMSF001L19+ ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
____________________________________________________________
consensus ATATTGCAGTCGAAATCCATAGCCCATTGGTTCAAATTACACGTCGCCACTTTCAACAGC
. : . : . : . : . : . :
JMSF041J04+ CTCATCTTTTCTTCTTCTCTCGGCTTCAATTGCTCTGCAAAATATTTAAATTTCTC
JMSF046P13+ CTCATCTTTTCTTCTTCTCTCGGCTTCAATTGCTCTGCAAAATATTTAAATTTCTC
JMSF052L13+ CTCATCTTTTCTTCTTCTC
JMFF048M05+ CTCATCTTTTCTTCTTCTCTGGGCTTCAATTGCTCTGCAAAATTTTTAAATTTCT
JMSF039I11+ CTCATCTTTTCTTCTTCTCTCGGCTTCAATTGCTCTGCAAAATATTTAAATTTCTC
JMSF001L19+ CTCATCTTTTCTTCTTCTCTCGGCTTCAATTGCTCTGCAAAATATTTAAATTTCTCAACC
____________________________________________________________
consensus CTCATCTTTTCTTCTTCTCTCGGCTTCAATTGCTCTGCAAAATATTTAAATTTCTCAACC