Contig 002042:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039J12Sequence563002042 (5)ref|XP_010275209.1|2e-93PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nel752010872 (5)ref|XP_009609671.1|4e-98PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nic
JMFF041P20Sequence651002042 (5)ref|XP_009609671.1|6e-94PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Nic586010872 (5)ref|XP_002278066.2|1e-70PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD8 [Vit
JMSF001I11Sequence265002042 (5)ref|XP_004245896.1|1e-25PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Sol
JMSF010I05Sequence305002042 (5)gb|AFK43954.1|4e-36unknown [Lotus japonicus]768014968ref|XP_006352857.1|2e-69PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9-like
JMSF025J18Sequence667002042 (5)ref|XP_004244392.1|2e-96PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Sol709010872 (5)ref|XP_011082364.1|6e-89PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD9 [Ses

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025J18+ TCACAACTGCAGGCCTCTTAA
JMFF041P20+ TAA
                      ____________________________________________________________
consensus TCACAACTGCAGGCCTCTTAA
 
. : . : . : . : . : . :
JMSF025J18+ AAGATGTGTGCACAACAGGACGAGAAGGTTTAGGTGAAGCAGAAACTTCACCAGTCTCAT
JMFF041P20+ AAGATGTGTGCACAACAGGACGAGAAGGTTTAGGTGAAGCAGAAACTTCACCAGTCTCAT
                      ____________________________________________________________
consensus AAGATGTGTGCACAACAGGACGAGAAGGTTTAGGTGAAGCAGAAACTTCACCAGTCTCAT
 
. : . : . : . : . : . :
JMSF025J18+ CTTTAACTGAAGAACTTTCTTTTGGTGTTTCACTACTCTTAGAATCAGAACATTCATTAG
JMFF041P20+ CTTTAACTGAAGAACTTTCTTTTGGTGTTTCACTACTCTTAGAATCAGAACATTCATTAG
                      ____________________________________________________________
consensus CTTTAACTGAAGAACTTTCTTTTGGTGTTTCACTACTCTTAGAATCAGAACATTCATTAG
 
. : . : . : . : . : . :
JMSF025J18+ TAGATGGTACATCCTTAGAGGCAACTGGTGACGATGGCAAACCTGCATCTTCTGCCATGC
JMFF041P20+ TAGATGGTACATCCTTAGAGGCAACTGGTGACGATGGCAAACCTGCATCTTCTGCCATGC
JMFF039J12+ CTGCATCTTCTGCCATGC
                      ____________________________________________________________
consensus TAGATGGTACATCCTTAGAGGCAACTGGTGACGATGGCAAACCTGCATCTTCTGCCATGC
 
. : . : . : . : . : . :
JMSF025J18+ TTTTAGCAACTTCTTTGGAGAGTAACTGCCTGTACAAGTCAGCAGCTCTAGAGGTATACT
JMFF041P20+ TTTTAGCAACTTCTTTGGAGAGTAACTGCCTGTACAAGTCAGCAGCTCTAGAGGTATACT
JMFF039J12+ TTTTAGCAACTTCTTTGGAGAGTAACTGCCTGTACAAGTCAGCAGCTCTAGAGGTATACT
                      ____________________________________________________________
consensus TTTTAGCAACTTCTTTGGAGAGTAACTGCCTGTACAAGTCAGCAGCTCTAGAGGTATACT
 
. : . : . : . : . : . :
JMSF025J18+ TGGCCTCAATCTTGCCTCCATCCGTCCATCCATGCTGCTTGAAAAAAACTTGAGCACGGT
JMFF041P20+ TGGCCTCAATCTTGCCTCCATCCGTCCATCCATGCTGCTTGAAAAAAACTTGAGCACGGT
JMFF039J12+ TGGCCTCAATCTTGCCTCCATCCGTCCATCCATGCTGCTTGAAAAAAACTTGAGCACGGT
                      ____________________________________________________________
consensus TGGCCTCAATCTTGCCTCCATCCGTCCATCCATGCTGCTTGAAAAAAACTTGAGCACGGT
 
. : . : . : . : . : . :
JMSF025J18+ TGTTTCCACCAAAGTACATCATCTTTAATTGTTCTGGAGTCCATGAATCTAAATCCGTTG
JMFF041P20+ TGTTTCCACCAAAGTACATCATCTTTAATTGTTCTGGAGTCCATGAATCTAAATCCGTTG
JMFF039J12+ TGTTTCCACCAAAGTACATCATCTTTAATTGTTCTGGAGTCCATGAATCTAAATCCGTTG
JMSF010I05+ GTTG
                      ____________________________________________________________
consensus TGTTTCCACCAAAGTACATCATCTTTAATTGTTCTGGAGTCCATGAATCTAAATCCGTTG
 
. : . : . : . : . : . :
JMSF025J18+ ACCTGACAAAGCTGACGTGAACACCGAGGTTCCGATGCACGGACGAACAGTCGATGCACA
JMFF041P20+ ACCTGACAAAGCTGACGTGAACACCGAGGTTCCGATGCACGGACGAACAGTCGATGCACA
JMFF039J12+ ACCTGACAAAGCTGACGTGAACACCGAGGTTCCGATGCACGGACGAACAGTCGATGCACA
JMSF010I05+ ACCTAACAAAGCTGACGTGAACGCCGAGGCTCCGATGTACGGCCGAGCAATCGATACACA
JMSF001I11+ CAATCGATACACA
                      ____________________________________________________________
consensus ACCTGACAAAGCTGACGTGAACACCGAGGTTCCGATGCACGGACGAACAGTCGATGCACA
 
. : . : . : . : . : . :
JMSF025J18+ GGAAGATGCCATACGTCACCGACGCCCATGTCGAATTCTTCGCATTGCAATCAAAACACA
JMFF041P20+ GGAAGATGCCATACGTCACCGACGCCCATGTCGAATTCTTCGCATTGCAATCAAAACACA
JMFF039J12+ GGAAGATGCCATACGTCACCGACGCCCATGTCGAATTCTTCGCATTGCAATCAAAACACA
JMSF010I05+ GGAAGATCCCATAAGTCACAGACGCCCAGGTTGGGTTCTTCGCATTGCAATCAAAACACA
JMSF001I11+ GGAAGATCCCATAAGTCACAGACGCCCAGGTTGGGTTCTTCGCATTGCAATCAAAACACA
                      ____________________________________________________________
consensus GGAAGATGCCATACGTCACCGACGCCCATGTCGAATTCTTCGCATTGCAATCAAAACACA
 
. : . : . : . : . : . :
JMSF025J18+ TCTTGTTTTCGGATTTTGCACGCAGCTTCCGAAATACAGCGTTTTTGTCGTTGAAATTAT
JMFF041P20+ TCTTGTTTTCGGATTTTGCACGCAGCTTCCGAAATACAGCGTTTTTGTCGTTGAAATTAT
JMFF039J12+ TCTTGTTTTCGGATTTTGCACGCAGCTTCCGAAATACAGCGTTTTTGTCGTTGAAATTAT
JMSF010I05+ TTTTGCTCTCGGTTTTCGCACGAAGCTTCCGGAAAACAGCATTCTTGTCGCTGAAATTCT
JMSF001I11+ TTTTGCTCTCGGTTTTCGCACGAAGCTTCCGGAAAACAGCATTCTTGTCGCTGAAATTCT
                      ____________________________________________________________
consensus TCTTGTTTTCGGATTTTGCACGCAGCTTCCGAAATACAGCGTTTTTGTCGTTGAAATTAT
 
. : . : . : . : . : . :
JMSF025J18+ CGGAAGCCATG
JMFF041P20+ CGGAAGCCATG
JMFF039J12+ CGGAAGCCATG
JMSF010I05+ CGGAAGCCATGGACGCTGTGGGGGAGAGAGACAGGAGTTCCGAGAGGAGGTGTAAGGAAT
JMSF001I11+ CGGAAGCCATGGACGCTGTGGGGGAGAGAGACAGGAGTTCCGAGAGGAGGTGTAAGGAAT
                      ____________________________________________________________
consensus CGGAAGCCATGGACGCTGTGGGGGAGAGAGACAGGAGTTCCGAGAGGAGGTGTAAGGAAT
 
. : . : . : . : . : . :
JMSF010I05+ AGAAATGGAGCTTTGCGTACAAGAGATAGAGATTGAGAAAGGCCTCCTCAGGGAACGC
JMSF001I11+ AGAAATGGAGCTTTGCGTACAAGAGATAGAGATTGAGAAAGGCCTCCTCAGGGAACGCTC
                      ____________________________________________________________
consensus AGAAATGGAGCTTTGCGTACAAGAGATAGAGATTGAGAAAGGCCTCCTCAGGGAACGCTC