Contig 002041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028H17Sequence491002041 (6)gb|EPS62179.1|1e-43phragmoplastin, partial [Genlisea aurea]
JMFS024A08Sequence617002041 (6)ref|XP_009621910.1|2e-101PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis]
JMSF001H17Sequence385002041 (6)ref|XP_011093033.1|5e-18PREDICTED: dynamin-related protein 5A-like [Sesamum indicum]730011290 (4)ref|XP_006339704.1|9e-104PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF011I18Sequence378002041 (6)gb|EPS62179.1|2e-33phragmoplastin, partial [Genlisea aurea]754011290 (4)ref|XP_006339704.1|1e-109PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF016C22Sequence255002041 (6)ref|XP_002456150.1|1e-12hypothetical protein SORBIDRAFT_03g031260 [Sorghum bicolor] gb|EES01270.1| hypot786011290 (4)ref|XP_006339704.1|2e-106PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF036C15Sequence683002041 (6)ref|XP_009621910.1|3e-119PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis]786011290 (4)ref|XP_006339704.1|2e-107PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036C15+ ACTTCACGAGAAACCTTGATTGCGTCT
                      ____________________________________________________________
consensus ACTTCACGAGAAACCTTGATTGCGTCT
 
. : . : . : . : . : . :
JMSF036C15+ GATGTAGCAAGATCTTGATTGGCCGGAGAAATTGCCAAAATGATACAATTTGGCTTCTCA
JMFS024A08+ CAATTTGGCTTCTCA
                      ____________________________________________________________
consensus GATGTAGCAAGATCTTGATTGGCCGGAGAAATTGCCAAAATGATACAATTTGGCTTCTCA
 
. : . : . : . : . : . :
JMSF036C15+ ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
JMFS024A08+ ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
                      ____________________________________________________________
consensus ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
 
. : . : . : . : . : . :
JMSF036C15+ GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
JMFS024A08+ GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
                      ____________________________________________________________
consensus GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
 
. : . : . : . : . : . :
JMSF036C15+ ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
JMFS024A08+ ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
                      ____________________________________________________________
consensus ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
 
. : . : . : . : . : . :
JMSF036C15+ TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
JMFS024A08+ TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
JMFF028H17+ CTTGGAAGGTGC
                      ____________________________________________________________
consensus TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
 
. : . : . : . : . : . :
JMSF036C15+ CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
JMFS024A08+ CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
JMSF011I18+ AAGCGATGAAGCTGTAGGACAAGCGGACGA
JMFF028H17+ CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
                      ____________________________________________________________
consensus CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
 
. : . : . : . : . : . :
JMSF036C15+ CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMFS024A08+ CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMSF011I18+ CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMFF028H17+ CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMSF001H17+ CTTCCCAACAATGCTTTCAAGCACT
                      ____________________________________________________________
consensus CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
 
. : . : . : . : . : . :
JMSF036C15+ GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMFS024A08+ GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMSF011I18+ GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMFF028H17+ GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMSF016C22+ GCGTCCCAGAGA
JMSF001H17+ GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
                      ____________________________________________________________
consensus GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
 
. : . : . : . : . : . :
JMSF036C15+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMFS024A08+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF011I18+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMFF028H17+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF016C22+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF001H17+ GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
                      ____________________________________________________________
consensus GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
 
. : . : . : . : . : . :
JMSF036C15+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMFS024A08+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF011I18+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMFF028H17+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF016C22+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF001H17+ TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
                      ____________________________________________________________
consensus TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
 
. : . : . : . : . : . :
JMSF036C15+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTC
JMFS024A08+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF011I18+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMFF028H17+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF016C22+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF001H17+ GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCCCAAAGA
                      ____________________________________________________________
consensus GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
 
. : . : . : . : . : . :
JMFS024A08+ GT
JMSF011I18+ GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGC
JMFF028H17+ GTGCGATTGAAGAGACGAACTAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
JMSF016C22+ GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
JMSF001H17+ GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
                      ____________________________________________________________
consensus GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
 
. : . : . : . : . : . :
JMFF028H17+ CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATC
JMSF016C22+ C
JMSF001H17+ CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATCC
                      ____________________________________________________________
consensus CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATCC