Contig 002041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028H17Sequence491002041 (6)gb|EPS62179.1|1e-43phragmoplastin, partial [Genlisea aurea]
JMFS024A08Sequence617002041 (6)ref|XP_009621910.1|2e-101PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis]
JMSF001H17Sequence385002041 (6)ref|XP_011093033.1|5e-18PREDICTED: dynamin-related protein 5A-like [Sesamum indicum]730011290 (4)ref|XP_006339704.1|9e-104PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF011I18Sequence378002041 (6)gb|EPS62179.1|2e-33phragmoplastin, partial [Genlisea aurea]754011290 (4)ref|XP_006339704.1|1e-109PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF016C22Sequence255002041 (6)ref|XP_002456150.1|1e-12hypothetical protein SORBIDRAFT_03g031260 [Sorghum bicolor] gb|EES01270.1| hypot786011290 (4)ref|XP_006339704.1|2e-106PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF036C15Sequence683002041 (6)ref|XP_009621910.1|3e-119PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis]786011290 (4)ref|XP_006339704.1|2e-107PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF036C15+                                            ACTTCACGAGAAACCTTGATTGCGTCT
                      ____________________________________________________________
consensus                                              ACTTCACGAGAAACCTTGATTGCGTCT
 
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JMSF036C15+           GATGTAGCAAGATCTTGATTGGCCGGAGAAATTGCCAAAATGATACAATTTGGCTTCTCA
JMFS024A08+                                                        CAATTTGGCTTCTCA
                      ____________________________________________________________
consensus             GATGTAGCAAGATCTTGATTGGCCGGAGAAATTGCCAAAATGATACAATTTGGCTTCTCA
 
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JMSF036C15+           ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
JMFS024A08+           ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
                      ____________________________________________________________
consensus             ACATAAGAACGAACCATGTTTTCAATGTCCTGCACAACGCTTTCAGGCTGGCCCTCAACA
 
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JMSF036C15+           GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
JMFS024A08+           GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
                      ____________________________________________________________
consensus             GCTACTTTAGTAAGTCCAGGAAGATCAATCAATGTCAAGTTCACAACATTAGGAGAATAT
 
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JMSF036C15+           ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
JMFS024A08+           ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
                      ____________________________________________________________
consensus             ATACTGAGATAGATTGGAACACTTGAGATAGCTTTAGAACGGCCCGTCTCTCGATCAGTT
 
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JMSF036C15+           TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
JMFS024A08+           TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
JMFF028H17+                                                           CTTGGAAGGTGC
                      ____________________________________________________________
consensus             TCATCAGCAATCTCCTTTCTTACAGCACCAAAGTCAGTAAATCTTTTCCTTGGAAGGTGC
 
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JMSF036C15+           CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
JMFS024A08+           CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
JMSF011I18+                                         AAGCGATGAAGCTGTAGGACAAGCGGACGA
JMFF028H17+           CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
                      ____________________________________________________________
consensus             CCAAATTCTGCATATTCTCGACCTTCATCTAAGCGATGAAGCTGTAGGACAAGCGGACGA
 
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JMSF036C15+           CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMFS024A08+           CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMSF011I18+           CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMFF028H17+           CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
JMSF001H17+                                              CTTCCCAACAATGCTTTCAAGCACT
                      ____________________________________________________________
consensus             CGGGTCACAATACCAGATCCACGAGGCAAAAAGTCCTTCCCAACAATGCTTTCAAGCACT
 
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JMSF036C15+           GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMFS024A08+           GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMSF011I18+           GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMFF028H17+           GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
JMSF016C22+                                                           GCGTCCCAGAGA
JMSF001H17+           GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
                      ____________________________________________________________
consensus             GAAGACTTCCCAGAACTCTGGCCACCAACGACGGCGATAGAAGGTAAGGCGTCCCAGAGA
 
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JMSF036C15+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMFS024A08+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF011I18+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMFF028H17+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF016C22+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
JMSF001H17+           GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
                      ____________________________________________________________
consensus             GTAGGCAAGGCACTGTCTTCGCCATGATCACCAAGCGCAGTGCAAGCTCTCTGCAACCTG
 
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JMSF036C15+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMFS024A08+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF011I18+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMFF028H17+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF016C22+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
JMSF001H17+           TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
                      ____________________________________________________________
consensus             TTCACTAACGAAATCAGGTTCTCCATAGTGTCGGCCGGATTCAGAGATCGGAGACGAGTT
 
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JMSF036C15+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTC     
JMFS024A08+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF011I18+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMFF028H17+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF016C22+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
JMSF001H17+           GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCCCAAAGA
                      ____________________________________________________________
consensus             GACTCGGCAACCACTCAATAAACTCCACCCGGCGAGTTGAAAGATGTACTCCCTCAAAGA
 
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JMFS024A08+           GT                                                          
JMSF011I18+           GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGC             
JMFF028H17+           GTGCGATTGAAGAGACGAACTAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
JMSF016C22+           GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
JMSF001H17+           GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
                      ____________________________________________________________
consensus             GTGCGATTGAAGAGACGAACGAAGAGTTTGAAGTTTGAAATGACGGCAATTTTCTGTTTT
 
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JMFF028H17+           CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATC 
JMSF016C22+           C                                                           
JMSF001H17+           CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATCC
                      ____________________________________________________________
consensus             CTATTTTCGTTTACTCATTATGCTACGCGTATATTTACTATCTAGTATCTACCAAAATCC