Contig 002040:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS143B05+                                                              CAACCCATC
                      ____________________________________________________________
consensus                                                                CAACCCATC
 
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JMFS143B05+           CTCCTCTTCCTNTTCCTCGCCCCCATTCATCTTCTCATCCTCATATTCCTCCTCCTCATC
                      ____________________________________________________________
consensus             CTCCTCTTCCTNTTCCTCGCCCCCATTCATCTTCTCATCCTCATATTCCTCCTCCTCATC
 
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JMFS143B05+           CTCCTCCTCCNTGAGCAGCCTAGCAGCCAACCTCTCCTTCCTAGCTGAAGTCTTCTTCTT
                      ____________________________________________________________
consensus             CTCCTCCTCCNTGAGCAGCCTAGCAGCCAACCTCTCCTTCCTAGCTGAAGTCTTCTTCTT
 
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JMFS143B05+           ACGCTGCCTCACTGCGGCCTCCGCCTCGGCAGCAGCAGCCGCCTGCAGCCTCGCGGCAGC
                      ____________________________________________________________
consensus             ACGCTGCCTCACTGCGGCCTCCGCCTCGGCAGCAGCAGCCGCCTGCAGCCTCGCGGCAGC
 
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JMFS143B05+           GCGTTTCGTGCACTCCCTCGCCGGCCTCTCTCTCCTAACTACAAAATTGTTGTTACTACA
                      ____________________________________________________________
consensus             GCGTTTCGTGCACTCCCTCGCCGGCCTCTCTCTCCTAACTACAAAATTGTTGTTACTACA
 
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JMFS143B05+           GTCACTGTTCCGTTTACTTAGCTTGCTATTACTGTGGTTACTGTTAGCAGTCTTGTCACC
                      ____________________________________________________________
consensus             GTCACTGTTCCGTTTACTTAGCTTGCTATTACTGTGGTTACTGTTAGCAGTCTTGTCACC
 
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JMFS143B05+           GGGATTCTGTTGGATCGGGGATGAACCGGACATGGCGAGATCAGAGAGGGGATTGTCTAC
                      ____________________________________________________________
consensus             GGGATTCTGTTGGATCGGGGATGAACCGGACATGGCGAGATCAGAGAGGGGATTGTCTAC
 
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JMFS143B05+           GGAGGGTTTAGCAGAGAGATCATGAGGTCGCATTGAGAAAAGAAGGACTCTTTTCTATTG
                      ____________________________________________________________
consensus             GGAGGGTTTAGCAGAGAGATCATGAGGTCGCATTGAGAAAAGAAGGACTCTTTTCTATTG
 
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JMFS143B05+           CAAGAACAAGAAACAGAGCTTTTTCGGCAAAGGGTTTCAGAAATTATCGCGAAAATTTGT
                      ____________________________________________________________
consensus             CAAGAACAAGAAACAGAGCTTTTTCGGCAAAGGGTTTCAGAAATTATCGCGAAAATTTGT
 
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JMFS143B05+           AATTTGTAATAAAATAAAAATAAAAAATATTGCTGTTAATACTCCTTATTTTATGAGTAG
JMSF001G22+                     AAAATAAAAATAAAAAATATTGCTGTTAATACTCCCTATTTTATGAGTAG
                      ____________________________________________________________
consensus             AATTTGTAATAAAATAAAAATAAAAAATATTGCTGTTAATACTCCTTATTTTATGAGTAG
 
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JMFS143B05+           GGTAAAACTGCAGAAATACATTAAGATTTAAGACAACATCATTCGATAATACGAAACATG
JMSF001G22+           GGTAAAACTGCAGAAATACACTAAGATTTAAGACANCATCNTTCGATAATACGAAACANG
                      ____________________________________________________________
consensus             GGTAAAACTGCAGAAATACATTAAGATTTAAGACAACATCATTCGATAATACGAAACATG
 
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JMFS143B05+           GATACTATAA                                                  
JMSF001G22+           GATACTATAATTCTGATAAATTTTTAAAAATAAATAATAAAAAACGAAGTTCAGCAGGTT
                      ____________________________________________________________
consensus             GATACTATAATTCTGATAAATTTTTAAAAATAAATAATAAAAAACGAAGTTCAGCAGGTT
 
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JMSF001G22+           TCTAGTGGGTGTTACACTGTTCTTGGGGTTTTGGACTTTTGGGGCAAAACTGCAAAAGAG
                      ____________________________________________________________
consensus             TCTAGTGGGTGTTACACTGTTCTTGGGGTTTTGGACTTTTGGGGCAAAACTGCAAAAGAG
 
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JMSF001G22+           ACACTGGATTTTCTTGAAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATC
                      ____________________________________________________________
consensus             ACACTGGATTTTCTTGAAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATC