Contig 002032:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF031G16+                                                     CATTACCTCAAGTGATGC
                      ____________________________________________________________
consensus                                                       CATTACCTCAAGTGATGC
 
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JMSF031G16+           AAGCCTATGAATTTTATCAGGAAGAGGTCCCCAAATACCCAGAGACACCAAGCTAAGAAC
                      ____________________________________________________________
consensus             AAGCCTATGAATTTTATCAGGAAGAGGTCCCCAAATACCCAGAGACACCAAGCTAAGAAC
 
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JMSF031G16+           CCTTAAGGTAGTTAGTCTAGTGAGAGTAACAACAAAAGAATCTATGGAGAAATGGTGAGA
                      ____________________________________________________________
consensus             CCTTAAGGTAGTTAGTCTAGTGAGAGTAACAACAAAAGAATCTATGGAGAAATGGTGAGA
 
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JMSF031G16+           TAAGGTCTGGTTTGGAACTGCAAATCCATTGAACTCACTAACCTTGACTGGCTTATCTCC
JMFF003L18+                                                                   CTCC
JMFS166C01+                                            CTCACTAACCTTGACTGGCTTATCTCC
                      ____________________________________________________________
consensus             TAAGGTCTGGTTTGGAACTGCAAATCCATTGAACTCACTAACCTTGACTGGCTTATCTCC
 
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JMSF031G16+           AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
JMFF003L18+           AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
JMFS166C01+           AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
                      ____________________________________________________________
consensus             AATAATCCTGAGCTCAGTAATTGAGTCTCCTTCACATGCAATGCTCATATGTGGTGATGA
 
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JMSF031G16+           AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
JMFF003L18+           AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
JMFS166C01+           AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
                      ____________________________________________________________
consensus             AGGGTAGTTACACAAATCACCATTGTAAGTCTCCCAAACATCCAGCAACACTGGGTATTC
 
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JMSF031G16+           CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
JMFF003L18+           CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
JMFS166C01+           CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
                      ____________________________________________________________
consensus             CAAATGCTTCCTTAACTGCAGAAGAAGTTGCCTATGATAAGACTGCAATTGATGAGTATT
 
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JMSF031G16+           TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
JMFF003L18+           TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
JMFS166C01+           TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
                      ____________________________________________________________
consensus             TGAGATGAAGGAAGCCCAGAATATGAGCATAAGAAGAGCAGGTATCTTCAGAGATCCCAT
 
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JMSF031G16+           CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
JMFF003L18+           CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
JMFS166C01+           CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
                      ____________________________________________________________
consensus             CTTAGCTGAAAACACAACACCCTAGGAAGTAGGAACAACTTATTTTATGCCAATCCTTTC
 
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JMSF031G16+           ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
JMFF003L18+           ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
JMFS166C01+           ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
                      ____________________________________________________________
consensus             ATGAGAATTAAAAGCAAACCCACCTAAAATTCTTCAAGAACTCAGCTAATGAGCTAAATT
 
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JMSF031G16+           CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
JMFF003L18+           CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
JMFS166C01+           CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
                      ____________________________________________________________
consensus             CTTGGTTATTCAAGAGGTGGAGTGAGCTCTAACAATCTGAGTGAAATTCAGAGAGCCCCA
 
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JMSF031G16+           AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCC                        
JMFF003L18+           AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
JMFS166C01+           AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
                      ____________________________________________________________
consensus             AAGTGCATTAAAAATGTAGAGTGGTTGCGAGAAGCCATGAAAGAAATGCAGAGAGAAAAG
 
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JMFF003L18+           GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
JMFS166C01+           GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
                      ____________________________________________________________
consensus             GTAAAATGTTGGCCAAAAGGAATGTCCTTTGTTTGTTTTGAAAGAAACAAATAAACAAAC
 
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JMFF003L18+           AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAA             
JMFS166C01+           AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAAGAGTGGGGAGAAA
                      ____________________________________________________________
consensus             AGGGGAGAGTCGTTGGGAAGAGAGAAGAGGAGAGGTGGTTGAAGAAAGAGTGGGGAGAAA