Contig 002024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS028E07Sequence662002024 (2)ref|XP_009758461.1|2e-83PREDICTED: subtilisin-like protease [Nicotiana sylvestris]
JMFS156C09Sequence593002024 (2)ref|XP_009758461.1|3e-71PREDICTED: subtilisin-like protease [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS028E07+                                         TACATAATCATGAGTNCCGGTATCATAAAC
                      ____________________________________________________________
consensus                                           TACATAATCATGAGTNCCGGTATCATAAAC
 
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JMFS028E07+           CAGACCCGGATCTGCTACCCTGGTTGGATCAACGTGCCCAGATCCATGAAAATAGGGCAC
                      ____________________________________________________________
consensus             CAGACCCGGATCTGCTACCCTGGTTGGATCAACGTGCCCAGATCCATGAAAATAGGGCAC
 
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JMFS028E07+           GGATGGTTGTCCAGTGGAAAGATCTATTATGGGACTCTCTTCGGATTTATGCACAGTGTA
                      ____________________________________________________________
consensus             GGATGGTTGTCCAGTGGAAAGATCTATTATGGGACTCTCTTCGGATTTATGCACAGTGTA
 
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JMFS028E07+           AGCTGTTGTCATGAGTGCAGACTTGATGGCACCTGGGTTCCACAGTGGATAGAGCTTTTG
                      ____________________________________________________________
consensus             AGCTGTTGTCATGAGTGCAGACTTGATGGCACCTGGGTTCCACAGTGGATAGAGCTTTTG
 
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JMFS028E07+           AAGCATGGCGGCCAATCCACTAACATGAGGACATGCCATGGAGGTGCCGGACATAATATT
                      ____________________________________________________________
consensus             AAGCATGGCGGCCAATCCACTAACATGAGGACATGCCATGGAGGTGCCGGACATAATATT
 
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JMFS028E07+           GAATTCCGTTTTTCTTTTATCGGAGGGAGATTGGGAGGGGCCTTCAGTGTCAATCCAGGC
                      ____________________________________________________________
consensus             GAATTCCGTTTTTCTTTTATCGGAGGGAGATTGGGAGGGGCCTTCAGTGTCAATCCAGGC
 
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JMFS028E07+           GGCTAGAATGTTAACTCCTGGTGCAATCACATCTGGTTTGAGAATTTCAGGAGTCACGAA
JMFS156C09+             CTAGAATGTTAACTCCTGGCGCAATCACGTCCGGTTTGAGAATTTCAGGAGTGATACG
                      ____________________________________________________________
consensus             GGCTAGAATGTTAACTCCTGGTGCAATCACGTCTGGTTTGAGAATTTCAGGAGTGATGCG
 
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JMFS028E07+           ATTGGGGCCTCGGCTTGAGAAAGCAGCCACACGCGGTGC                     
JMFS156C09+           ATTAGGGCCGCGGCTTGAGAAAGCCGCCACACGCGGTGCCGACGGCGAGGAGGCTCCTCC
                      ____________________________________________________________
consensus             ATTGGGGCCTCGGCTTGAGAAAGCCGCCACACGCGGTGCCGACGGCGAGGAGGCTCCTCC
 
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JMFS156C09+           GATTACGGTTCCCCGGGATGCAATTGTAGCGGTTGGCCAGGGATTGGACCTTATATACTC
                      ____________________________________________________________
consensus             GATTACGGTTCCCCGGGATGCAATTGTAGCGGTTGGCCAGGGATTGGACCTTATATACTC
 
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JMFS156C09+           CCGGATTTTGTCTCCGTCGCTTGTAGAAACAAGTGACGTCGGAATCCGATGCGGCTGCGC
                      ____________________________________________________________
consensus             CCGGATTTTGTCTCCGTCGCTTGTAGAAACAAGTGACGTCGGAATCCGATGCGGCTGCGC
 
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JMFS156C09+           CATAAGCTGTTCGCCATAACCAGGCCGGTTAGCAATGATGATTCCAACGCCGCCAGCTTG
                      ____________________________________________________________
consensus             CATAAGCTGTTCGCCATAACCAGGCCGGTTAGCAATGATGATTCCAACGCCGCCAGCTTG
 
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JMFS156C09+           TGTTACAGCAATTCCTTTTGAAATCTCTGAAATATCGCCTTGTGATAAGGACTCACAAAA
                      ____________________________________________________________
consensus             TGTTACAGCAATTCCTTTTGAAATCTCTGAAATATCGCCTTGTGATAAGGACTCACAAAA
 
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JMFS156C09+           CACGATTCTTCCCCAGACTTTTGAAGCATCAAGTTCTCCGGGACGACAGTATATGCTGTT
                      ____________________________________________________________
consensus             CACGATTCTTCCCCAGACTTTTGAAGCATCAAGTTCTCCGGGACGACAGTATATGCTGTT