| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K22 | Sequence | 572 | 007573 (10) | ref|XP_006355338.1| | 1e-83 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | 718 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 5e-62 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] |
| JMFF033F07 | Sequence | 596 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 1e-44 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] | 633 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 2e-44 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] |
| JMFS055E02 | Sequence | 277 | 002020 (7) | gb|AAD46410.1|AF096260_1 | 9e-45 | ER66 protein [Solanum lycopersicum] | |||||
| JMFS063A12 | Sequence | 642 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 4e-83 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] | |||||
| JMFS153G06 | Sequence | 592 | 002020 (7) | gb|AAD46410.1|AF096260_1 | 6e-80 | ER66 protein [Solanum lycopersicum] | |||||
| JMSF040A15 | Sequence | 578 | 007573 (10) | ref|XP_006355338.1| | 5e-39 | PREDICTED: calmodulin-binding transcription activator 3-like [Solanum tuberosum | 819 | 002020 (7) | gb|AAG39222.1|AF253511_1 | 4e-81 | anther ethylene-upregulated protein ER1 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMFF033F07- TGATAACTAATCAACTGAAAAACATTCTTGT
rJMFF004K22- TTGATAACTAATCAACTGAAAAACATTCTTGT
rJMSF040A15- T
____________________________________________________________
consensus TTGATAACTAATCAACTGAAAAACATTCTTGT
. : . : . : . : . : . :
rJMFF033F07- CAGGCCACAACTATATATGTAATTTTCAAGC-TGGAAATCTACGAGTTTATTGTACATAT
JMFF033F07+ ACAACTATATATGTAATTTTCAAGC-TGGAAATCTACGAGTTTATTGTACATAT
rJMFF004K22- CAGGCCACAACTATATATGTAATTTTCAAGC-TGGAAATCTACGAGTTTATTGTACATAT
rJMSF040A15- CAGGCCACAACTATATATGTAATTTTCAAGCGTGGAAATCTACGAGTTTATTGTACATAT
____________________________________________________________
consensus CAGGCCACAACTATATATGTAATTTTCAAGC-TGGAAATCTACGAGTTTATTGTACATAT
. : . : . : . : . : . :
rJMFF033F07- ATTGGATACAATCAAACTTGCATCATATACAACAAATTCATCACAAATCAACTTCGAACA
JMFF033F07+ ATTGGATACAATCAAACTTGCATCATATACAACAAATTCATCACAAATCAACTTCGAACA
rJMFF004K22- ATTGGATACAATCAAACTTGCATCATATACAACAAATTCATCACAAATCAACTTCGAACA
rJMSF040A15- ATTGGATACAATCAAACTTGCATCATATACAACAAATTCATCACAAATCAACTTCGAACA
____________________________________________________________
consensus ATTGGATACAATCAAACTTGCATCATATACAACAAATTCATCACAAATCAACTTCGAACA
. : . : . : . : . : . :
rJMFF033F07- TTCCAGTTAGGACACATCTATGATTTTTGTCAGGGAAGCAGGAAGCCTATGTATAAAATG
JMFF033F07+ TTCCAGTTAGGACACATCTATGATTTTTGTCAGGGAAGCAGGAAGCCTATGTATAAAATG
rJMFF004K22- TTCCAGTTAGGACACATCTATGATTTTTGTCAGGGAAGCAGGAAGCCTATGTATAAAATG
JMFS063A12+ AAGCAGGAAGCCTATGTATANAATG
rJMSF040A15- TTCCAGTTAGGACACATCTATGATTTTTGTCAGGGAAGCAGGAAGCCTATGTATAAAATG
____________________________________________________________
consensus TTCCAGTTAGGACACATCTATGATTTTTGTCAGGGAAGCAGGAAGCCTATGTATAAAATG
. : . : . : . : . : . :
rJMFF033F07- CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
JMFF033F07+ CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
rJMFF004K22- CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
JMFS063A12+ CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
rJMSF040A15- CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
____________________________________________________________
consensus CTAGTACTTAAGCATCGATATATACTCCAAGCAAGACGAGAGTTTAGAGATTTTATTACG
. : . : . : . : . : . :
rJMFF033F07- CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
JMFF033F07+ CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
rJMFF004K22- CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
JMFS063A12+ CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
rJMSF040A15- CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
____________________________________________________________
consensus CAAAGGACATGTAGGTGTCATCGTCCAACAATGCGTCCAGGTCAATCAGATCTTCATCAA
. : . : . : . : . : . :
rJMFF033F07- AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
JMFF033F07+ AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
JMFS055E02+ AGTTTCCTTCA
rJMFF004K22- AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
JMFS063A12+ AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
rJMSF040A15- AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
____________________________________________________________
consensus AATCGCCCACTTCACCTGAATTGCTCGGGTCCCCATCATATTTTTTCTTAGTTTCCTTCA
. : . : . : . : . : . :
rJMFF033F07- TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
JMFF033F07+ TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
JMFS055E02+ TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
rJMFF004K22- TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
JMFS063A12+ TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
rJMSF040A15- TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
____________________________________________________________
consensus TTTCAGAGACGACGTTTAGCAGTCTTCGGTATTGATCTCTGGCCTCGGGATATTGAACCA
. : . : . : . : . : . :
rJMFF033F07- TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
JMFF033F07+ TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
JMFS055E02+ TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
rJMFF004K22- TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
JMFS063A12+ TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
rJMSF040A15- TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
____________________________________________________________
consensus TGGATCTCACCCTGGCAAGAGCCTTCTGCAATCTTTCCTCGGTTTGTTTTCTGCCTTCTT
. : . : . : . : . : . :
rJMFF033F07- TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
JMFF033F07+ TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
JMFS055E02+ TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
rJMFF004K22- TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
JMFS063A12+ TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
rJMSF040A15- TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
JMFS153G06+ TCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
____________________________________________________________
consensus TTAGAAAATCAAACTCATCTTCTTGCACGGGTTGGGCTTGCATGCTAGAGGGTTCGGTGA
. : . : . : . : . : . :
rJMFF033F07- CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
JMFF033F07+ CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
JMFS055E02+ CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
rJMFF004K22- CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
JMFS063A12+ CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
rJMSF040A15- CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
JMFS153G06+ CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
____________________________________________________________
consensus CTGTTTCTGGTTTAAACCCCCGCAGACCACTCCCTTTTCGTCTCCATCGCAAAATTACCT
. : . : . : . : . : . :
rJMFF033F07- TCT
JMFF033F07+ TCT
JMFS055E02+ TCTCCAGTATCCCAACAGAC
rJMFF004K22- TCTCCAGTATCCCAACAGACCAGATTATCTTTCCATAGNTCTTCCTGACTTGATGTCCCC
JMFS063A12+ TCTCCAGTATCCCAACAGACCAGATTATCTTTCCATAGTTCTTCCTGACTTGATGTCCCC
rJMSF040A15- TCTCCAGTATCCCAACAGACCAGATTATCTTTCCATAGTTCTTCCTGACTTGATGTCCCC
JMFS153G06+ TCTCCAGTATCCCAACAGACCAGATTATCTTTCCATAGTTCTTCCTGACTTGATGTCCCC
____________________________________________________________
consensus TCTCCAGTATCCCAACAGACCAGATTATCTTTCCATAGTTCTTCCTGACTTGATGTCCCC
. : . : . : . : . : . :
rJMFF004K22- TTACGTGCGCCTGAATTTTAATGATTT
JMFS063A12+ TTACGTGCGCCTGAATTTTAATGATTTGTTGCCGAATTTGAAGAAACTCTTTTCGTCCCT
rJMSF040A15- TTACGTGCGCCTGAATTTTAATGATTTGTTGCCGAATTTGAAGAAACTCTTTTCGTCCCT
JMFS153G06+ TTACGTGCGCCTGAATTTTAATGATTTGTTGCCGAATTTGAAGAAACTCTTTTCGTCCCT
____________________________________________________________
consensus TTACGTGCGCCTGAATTTTAATGATTTGTTGCCGAATTTGAAGAAACTCTTTTCGTCCCT
. : . : . : . : . : . :
JMFS063A12+ TATAACTGCGGTATTTGTTTTGTATTCGTATTGCAGCAGAGTGAGTTGGTTCATCATAGT
rJMSF040A15- TATAACTGCGGTATTTGTTTTGTATTCGTATTGCAGCAGAGTGAGTTGGTTCATCATAGT
JMFS153G06+ TATAACTGCGGTATTTGTTTTGTATTCGTATTGCAGCAGAGTGAGTTGGTTCATCATAGT
____________________________________________________________
consensus TATAACTGCGGTATTTGTTTTGTATTCGTATTGCAGCAGAGTGAGTTGGTTCATCATAGT
. : . : . : . : . : . :
JMFS063A12+ GTCCTGCCCTG
rJMSF040A15- GTCCTGCCCTG
JMFS153G06+ GTCCTGCCCTGTTCTTCACAGCACGGAGTGAAAGAGCACGCTCATCGGGCAATCCAAATT
____________________________________________________________
consensus GTCCTGCCCTGTTCTTCACAGCACGGAGTGAAAGAGCACGCTCATCGGGCAATCCAAATT
. : . : . : . : . : . :
JMFS153G06+ CACCACCGCCGCCATATTCTTTTATCTGCTTCCTTTGGAACGACTCGACCCTGTAGACTT
____________________________________________________________
consensus CACCACCGCCGCCATATTCTTTTATCTGCTTCCTTTGGAACGACTCGACCCTGTAGACTT
. : . : . : . : . : . :
JMFS153G06+ GATGAATGCGAGCAGCAGCTTGGGTTGCATTACGAACAGCTGCCAGAGAGTCCTTCATTG
____________________________________________________________
consensus GATGAATGCGAGCAGCAGCTTGGGTTGCATTACGAACAGCTGCCAGAGAGTCCTTCATTG
. : . : . : . : . : . :
JMFS153G06+ ACAATCCATCTGGCCAATCGCCATCGCCAACGGGAGTAGCAACCCGTTCAGAAACCATTT
____________________________________________________________
consensus ACAATCCATCTGGCCAATCGCCATCGCCAACGGGAGTAGCAACCCGTTCAGAAACCATTT
. : . : . : . : . : . :
JMFS153G06+ GCACAGCTGTTAACCCCGAGACTTCAGTGCTTTCATCCTCCCGGTTTTCCTTCAATTTAA
____________________________________________________________
consensus GCACAGCTGTTAACCCCGAGACTTCAGTGCTTTCATCCTCCCGGTTTTCCTTCAATTTAA