Contig 002017:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS153B12Sequence341002017 (2)
JMSF014C08Sequence486013299 (8)ref|XP_006357886.1|4e-66PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]781002017 (2)ref|XP_009757679.1|2e-62PREDICTED: heat shock 70 kDa protein 17 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF014C08+                           AAGAATGGTTATACACTGATGGTGAAGATGCATCAGCCACAGA
                      ____________________________________________________________
consensus                              AAGAATGGTTATACACTGATGGTGAAGATGCATCAGCCACAGA
 
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rJMSF014C08+          ATTTGAGAAAAAATTAGATATGTTGAAGGCTATTGGTGATCCTATATTCCATAGATATAA
                      ____________________________________________________________
consensus             ATTTGAGAAAAAATTAGATATGTTGAAGGCTATTGGTGATCCTATATTCCATAGATATAA
 
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rJMSF014C08+          TGAGCTTACTGCACGCCCTGCTGCATCTGAACATGCTCGACGCTACCTCACTGAATTGCA
                      ____________________________________________________________
consensus             TGAGCTTACTGCACGCCCTGCTGCATCTGAACATGCTCGACGCTACCTCACTGAATTGCA
 
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rJMSF014C08+          ACAGATTGTGCAAAGATGGGAAACAGATAAATCTTGGCTTCCTAGAGGGAGAATTGATGA
                      ____________________________________________________________
consensus             ACAGATTGTGCAAAGATGGGAAACAGATAAATCTTGGCTTCCTAGAGGGAGAATTGATGA
 
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rJMSF014C08+          GGTTCTGGCTGAGGCTGAGAAACTGAAGAGTTGGCTGAATGAGAAGGAGGCTGAGCAGGC
                      ____________________________________________________________
consensus             GGTTCTGGCTGAGGCTGAGAAACTGAAGAGTTGGCTGAATGAGAAGGAGGCTGAGCAGGC
 
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rJMSF014C08+          TAAGACTCCAGGATATAGCAAACCAGTATTCACATCAGAAGAAGTATACAACAAGTTATT
                      ____________________________________________________________
consensus             TAAGACTCCAGGATATAGCAAACCAGTATTCACATCAGAAGAAGTATACAACAAGTTATT
 
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rJMSF014C08+          TGATCTTCAAGATAAGGTGGCCAAGGTCAATAAAATTCCTAAACCAAAGCCAAAGGTCGA
                      ____________________________________________________________
consensus             TGATCTTCAAGATAAGGTGGCCAAGGTCAATAAAATTCCTAAACCAAAGCCAAAGGTCGA
 
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rJMSF014C08+          GAAGCCCGCAAAGAATGAAACCGAGAACAATGGACAAAAAGAAAAGGCTGACTCGTCTTC
                      ____________________________________________________________
consensus             GAAGCCCGCAAAGAATGAAACCGAGAACAATGGACAAAAAGAAAAGGCTGACTCGTCTTC
 
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rJMSF014C08+          TGAGGAACCCTCAAAGAAAGAGCAAACTGGAGATTCGGAGAAACCAGCCAGTGGTGAAAA
JMFS153B12+                              GAGCAAACTGGAGATTCGGAGAAACCAGCCAGTGGTGAAAA
                      ____________________________________________________________
consensus             TGAGGAACCCTCAAAGAAAGAGCAAACTGGAGATTCGGAGAAACCAGCCAGTGGTGAAAA
 
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rJMSF014C08+          ACCTAGTGCCAAATCCAACGGTGATGGCCAGACAGAAAGGCACGATGAGTTATGATTTTT
JMFS153B12+           ACCTAGTGCCAAATCCAACGGTGATGGCCAGACAGAAAGGCACGATGAGTTATGATTTTT
                      ____________________________________________________________
consensus             ACCTAGTGCCAAATCCAACGGTGATGGCCAGACAGAAAGGCACGATGAGTTATGATTTTT
 
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rJMSF014C08+          TTAGAACAAATTCACGTAGGCATATAGAGGTTAGAAAGAGACAAGAACAGCAACTTCAAT
JMFS153B12+           TTAGAACAAATTCACGTAGGCATATAGAGGTTAGAAAGAGACAAGAACAGCAACTTCAAT
                      ____________________________________________________________
consensus             TTAGAACAAATTCACGTAGGCATATAGAGGTTAGAAAGAGACAAGAACAGCAACTTCAAT
 
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rJMSF014C08+          GGAGGAGTGAAGTGAAGCCCCATGTTTCTTGATCCCACTCTCCCTTTGTTAAACTTTGAA
JMFS153B12+           GGAGGAGTGAAGTGAAGCCCCATGTTTCTTGATCCCACTCTCCCTTTGTTAAACTTTGAA
                      ____________________________________________________________
consensus             GGAGGAGTGAAGTGAAGCCCCATGTTTCTTGATCCCACTCTCCCTTTGTTAAACTTTGAA
 
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rJMSF014C08+          TAGTCAATGCCAAGAGGATCATATGCTTCATTTGAGTTATTTGTAGCAAAACACTCCTGT
JMFS153B12+           TAGTCAATGCCAAGAGGATCATATGCTTCATTTGAGTTATTTGTAGCAAAACACTCCTGT
                      ____________________________________________________________
consensus             TAGTCAATGCCAAGAGGATCATATGCTTCATTTGAGTTATTTGTAGCAAAACACTCCTGT
 
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rJMSF014C08+          ATAAACTCCAAGATAACA                                          
JMFS153B12+           ATAAACTCCAAGATAACATGCAGCATTTGAACTGCAAAAAGAATTTTGTTAGCTTTGTCC
                      ____________________________________________________________
consensus             ATAAACTCCAAGATAACATGCAGCATTTGAACTGCAAAAAGAATTTTGTTAGCTTTGTCC