Contig 002016:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023C03Sequence567002016 (5)gb|KDO82526.1|9e-75hypothetical protein CISIN_1g0450232mg, partial [Citrus sinensis]
JMFS107H12Sequence623002016 (5)gb|KDO82526.1|4e-71hypothetical protein CISIN_1g0450232mg, partial [Citrus sinensis]
JMFS111C10Sequence621002016 (5)gb|KDO82526.1|3e-65hypothetical protein CISIN_1g0450232mg, partial [Citrus sinensis]
JMFS151G01Sequence624002016 (5)gb|KDO82526.1|2e-65hypothetical protein CISIN_1g0450232mg, partial [Citrus sinensis]
JMFS153H12Sequence639002016 (5)gb|KDO82526.1|9e-86hypothetical protein CISIN_1g0450232mg, partial [Citrus sinensis]

Alignment

This contig is upended


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JMFS153H12+                               ATTTCCCAGAGCACAGAGAGCAAGTCCAACAATATATTGA
                      ____________________________________________________________
consensus                                 ATTTCCCAGAGCACAGAGAGCAAGTCCAACAATATATTGA
 
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JMFS023C03+                GTGGTTAAGATCTTGTTNTATTGAATTGGTGACCAACATTAGAACTTCTTGTCTT
JMFS153H12+           TTGGTGTGGTTAAGATCTTGTTTTATCGAGTTGGTGACCAACATCAAAACTTCTTGTCTT
JMFS107H12+                        GATCTTGTTTTATCGAGTTGGTGACCAACATCAAAACTTCTTGTCTT
JMFS111C10+                                             TGACCAACATCAAAACTTCTTGTCTT
JMFS151G01+                                               ACCAACATCAAAACTTCTTGTCTT
                      ____________________________________________________________
consensus             TTGGTGTGGTTAAGATCTTGTTTTATCGAGTTGGTGACCAACATCAAAACTTCTTGTCTT
 
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JMFS023C03+           TCATCAAGGAGCAACATAAGGCCAAGATATCCTATTCTTTTCTCAGGGAATCCTGGAGAT
JMFS153H12+           TCATCGAGAAGCAGCATAAGACCAAGATATCCTATTCTCTTTTCTGGGAATCCAGGAGAT
JMFS107H12+           TCATCGAGAAGCAGCATAAGACCAAGATATCCTATTCTCTTTTCTGGGAATCCAGGAGAT
JMFS111C10+           TCATCGAGAAGCAGCATAAGACCAAGATATCCTATTCTCTTNTCTGGGAATCCAGGAGAT
JMFS151G01+           TCATCGAGAAGCAGCATAAGACCAAGATATCCTATTCTCTTTTCTGGGAATCCAGGAGAT
                      ____________________________________________________________
consensus             TCATCGAGAAGCAGCATAAGACCAAGATATCCTATTCTCTTTTCTGGGAATCCAGGAGAT
 
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JMFS023C03+           GCAATTAACTTCAAGCATTCCATTTGACCAAAGTGTGTGGGATAGCCTAGCATGTGAATA
JMFS153H12+           GCAATTGACTTTAAGCATTCCATTTGACCAAAGTGTGTTGGATAGCCTAGCATGTGAATG
JMFS107H12+           GCAATTGACTTTAAGCATTCCATTTGACCAAAGTGTGTTGGATAGCCTAGCATGTGAATG
JMFS111C10+           GCAATTGACTTTAAGCATTCCATTTGACCAAAGTGTGTTGGATAGCCTAGCATGTGAATG
JMFS151G01+           GCAATTGACTTTAAGCATTCCATTTGACCAAAGTGTGTTGGATAGCCTAGCATGTGAATG
                      ____________________________________________________________
consensus             GCAATTGACTTTAAGCATTCCATTTGACCAAAGTGTGTTGGATAGCCTAGCATGTGAATG
 
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JMFS023C03+           AACATGAGCTTTGCGAGATTACGATGCCTATAATCATGATCATTCTCGCTGATTGCCGCT
JMFS153H12+           AACATGAGCTTTGCAAGATTGCGATGAGTATAATCTTGGTCATTCTCACTGATTGCATCT
JMFS107H12+           AACATGAGCTTTGCAAGATTGCGATGAGTATAATCTTGGTCATTCTCACTGATTGCATCT
JMFS111C10+           AACATGAGCTTTGCAAGATTGCGATGAGTATAATCTTGGTCATTCTCACTGATTGCATCT
JMFS151G01+           AACATGAGCTTTGCAAGATTGCGATGAGTATAATCTTGGTCATTCTCACTGATTGCATCT
                      ____________________________________________________________
consensus             AACATGAGCTTTGCAAGATTGCGATGAGTATAATCTTGGTCATTCTCACTGATTGCATCT
 
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JMFS023C03+           CGAATAGCAGCACACTCTTTTCTCACTACAGCACGCTCTTCTGCTGCAGTTTTGCATGCA
JMFS153H12+           CGAAGAGCAGCACACTCTTTTCTCACAACAGCACGCTCCTCTGCAGCTGTTTTGCATGCA
JMFS107H12+           CGAAGAGCAGCACACTCTTTTCTCACAACAGCACGCTCCTCTGCAGCTGTTTTGCATGCA
JMFS111C10+           CGAAGAGCAGCACACTCTTTTCTCACAACAGCACGCTCCTCTGCAGCTGTTTTGCATGCA
JMFS151G01+           CGAAGAGCAGCACACTCTTTTCTCACAACAGCACGCTCCTCTGCAGCTGTTTTGCATGCA
                      ____________________________________________________________
consensus             CGAAGAGCAGCACACTCTTTTCTCACAACAGCACGCTCCTCTGCAGCTGTTTTGCATGCA
 
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JMFS023C03+           CGTATGGAACGAATCATGTCCCTGAGGCGGGTGCCGGAGGAGAAGGGATTCATGATTGGG
JMFS153H12+           CGTATAGCCCGAATCATGTCCCGGAGGCGCGTGCCGGAGGAGAAGGGATTCATGATTGGG
JMFS107H12+           CGTATAGCCCGAATCATGTCCCGGAGGCGCGTGCCGGAGGAGAAGGGATTCATGATTGGG
JMFS111C10+           CGTATAGCCCGAATCATGTCCCGGAGGCGCGTGCCGGAGGAGAAGGGATTCATGATTGGG
JMFS151G01+           CGTATAGCCCGAATCATGTCCCGGAGGCGCGTGCCGGAGGAGAAGGGATTCATGATTGGG
                      ____________________________________________________________
consensus             CGTATAGCCCGAATCATGTCCCGGAGGCGCGTGCCGGAGGAGAAGGGATTCATGATTGGG
 
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JMFS153H12+           GCGTTGGTTTTGAAACTGTGAGAAAGCTCGATCAGATCCAGCTGCACAGACAGTTGTGAA
JMFS107H12+           GCGTTGGTTTTGAAACTGTGAGAAAGCTCGATCAGATCCAGCTGCACAGACAGTTGTGAA
JMFS111C10+           GCGTTGGTTTTGAAACTGTGAGAAAGCTCGATCAGATCCAGCTGCACAGACAGTTGTGAA
JMFS151G01+           GCGTTGGTTTTGAAACTGTGAGAAAGCTCGATCAGATCCAGCTGCACAGACAGTTGTGAA
                      ____________________________________________________________
consensus             GCGTTGGTTTTGAAACTGTGAGAAAGCTCGATCAGATCCAGCTGCACAGACAGTTGTGAA
 
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JMFS153H12+           TTGAAGGAATTGGCCGCCCCTCCCTCTTTCCGCCAAAGAGCTCGATCATTCAACCGAGTC
JMFS107H12+           TTGAAGGAATTGGCCGCCCCTCCCTCTTTCCGCCAAAGAGCTCGATCATTCAACCGAGTC
JMFS111C10+           TTGAAGGAATTGGCCGCCCCTCCCTCTTTCCGCCAAAGAGCTCGATCATTCAACCGAGTC
JMFS151G01+           TTGAAGGAATTGGCCGCCCCTCCCTCTTTCCGCCAAAGAGCTCGATCATTCAACCGAGTC
                      ____________________________________________________________
consensus             TTGAAGGAATTGGCCGCCCCTCCCTCTTTCCGCCAAAGAGCTCGATCATTCAACCGAGTC
 
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JMFS153H12+           AGTACCAGAGAGGGCTTCAATCCACAGCTGCGAACACTGCGTCAGAGATCTAAGGATGAA
JMFS107H12+           AGTACCAGAGAGGGCTTCAATCCACAGCTGCGAACACTGCGTCAGAGATCTAAGGATGAA
JMFS111C10+           AGTACCAGAGAGGGCTTCAATCCACAGCTGCGAACACTGCGTCAGAGATCTAAGGATGAA
JMFS151G01+           AGTACCAGAGAGGGCTTCAATCCACAGCTGCGAACACTGCGTCAGAGATCTAAGGATGAA
                      ____________________________________________________________
consensus             AGTACCAGAGAGGGCTTCAATCCACAGCTGCGAACACTGCGTCAGAGATCTAAGGATGAA
 
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JMFS153H12+           TTCGAAGGATCTGAGGAGGAATCAGAGGCCTGGATCTGGAGAGAAAATGGCAGTAATTC 
JMFS107H12+           TTCGAAGGATCTGAGGAGGAATCAGAGGCCTGGATCTGGAGAGAAAATGGCAGTAATTCT
JMFS111C10+           TTCGAAGGATCTGAGGAGGAATCAGAGGCCTGGATCTGGAGAGAAAATGGCAGTAATTCT
JMFS151G01+           TTCGAAGGATCTGAGGAGGAATCAGAGGCCTGGATCTGGAGAGAAAATGGCAGTAATTCT
                      ____________________________________________________________
consensus             TTCGAAGGATCTGAGGAGGAATCAGAGGCCTGGATCTGGAGAGAAAATGGCAGTAATTCT
 
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JMFS107H12+           CTGTATGTATAATAATTAATAGCTATCTGTAAATCA                        
JMFS111C10+           CTGTATGTATAATAATTAATAGCTATCTGTAAATCAATTTGTGAGGAAGATGAAA     
JMFS151G01+           CTGTATGTATAATAATTAATAGCTATCTGTAAATCAATTTGTGAGGAAGATGAAATCTCA
                      ____________________________________________________________
consensus             CTGTATGTATAATAATTAATAGCTATCTGTAAATCAATTTGTGAGGAAGATGAAATCTCA