Contig 002011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS091C09Sequence632002011 (3)ref|XP_010325817.1|1e-63PREDICTED: uncharacterized protein LOC101256431 isoform X2 [Solanum lycopersicu
JMFS135F09Sequence528002011 (3)gb|EYU32007.1|5e-34hypothetical protein MIMGU_mgv1a0012301mg, partial [Erythranthe guttata]
JMFS148G07Sequence655002011 (3)ref|XP_009605449.1|3e-58PREDICTED: rootletin isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS091C09+                      ATGCTTAAGTCTAGCTTCAGGGCTATTTTTATTCAACTTTTCCCAGTTG
JMFS148G07+              ATGTCGCCATGCTTAAGTCTAGCTTCAGGGCTA-TTTTATTCAACTTTTCCCAGTTG
                      ____________________________________________________________
consensus                ATGTCGCCATGCTTAAGTCTAGCTTCAGGGCTATTTTTATTCAACTTTTCCCAGTTG
 
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JMFS091C09+           AGATATGTCCCATTCGTGCTAGAATCTTTCAGAAATACTAAAGTGTTGTGCTCTGTATCT
JMFS148G07+           AGATATGTCCCATTCGTGCTAGAATCTTTCAGAAATACTAAAGTGTTGTGCTCTGTATCT
                      ____________________________________________________________
consensus             AGATATGTCCCATTCGTGCTAGAATCTTTCAGAAATACTAAAGTGTTGTGCTCTGTATCT
 
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JMFS091C09+           TCATTAGCAATCCTTTTCCTATAGATCTTGCAATGTGATGCACTAACAGCTGGGGATGAA
JMFS135F09+                  CAATCCTTTTCCTATAGATCTTGCAATGTGATGCACTAACAGCTGGGGATGAA
JMFS148G07+           TCATTAGCAATCCTTTTCCTATAGATCTTGCAATGTGATGCACTAACAGCTGGGGATGAA
                      ____________________________________________________________
consensus             TCATTAGCAATCCTTTTCCTATAGATCTTGCAATGTGATGCACTAACAGCTGGGGATGAA
 
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JMFS091C09+           ATTTGGAACCGAGCATCACCCACCAAGCGGCCAATGCGATGTTCTCCAGCTGTCAAAAGT
JMFS135F09+           ATTTGGAACCGAGCATCACCCACCAAGCGGCCAATGCGATGTTCTCCAGCTGTCAAAAGT
JMFS148G07+           ATTTGGAACCGAGCATCACCCACCAAGCGGCCAATGCGATGTTCTCCAGCTGTCAAAAGT
                      ____________________________________________________________
consensus             ATTTGGAACCGAGCATCACCCACCAAGCGGCCAATGCGATGTTCTCCAGCTGTCAAAAGT
 
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JMFS091C09+           ATATTTATGCCCTGGTTACGTTTGCGAGCCTTGTCGGAAATGGCTGTGAGGACACCCCAA
JMFS135F09+           ATATTTATGCCCTGGTTACGTTTGCGAGCCTTGTCGGAAATGGCTGTGAGGACACCCCAA
JMFS148G07+           ATATTTATGCCCTGGTTACGTTTGCGAGCCTTGTCGGAAATGGCTGTGAGGACACCCCAA
                      ____________________________________________________________
consensus             ATATTTATGCCCTGGTTACGTTTGCGAGCCTTGTCGGAAATGGCTGTGAGGACACCCCAA
 
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JMFS091C09+           ACGTCAGGATCGGAGTACTGAAGAGGCTGCGAAGCGAACTTGGAGGCGACGAGGAGTATG
JMFS135F09+           ACGTCAGGATCGGAGTACTGAAGAGGCTGCGAAGCGAACTTGGAGGCGACGAGGAGTATG
JMFS148G07+           ACGTCAGGATCGGAGTACTGAAGAGGCTGCGAAGCGAACTTGGAGGCGACGAGGAGTATG
                      ____________________________________________________________
consensus             ACGTCAGGATCGGAGTACTGAAGAGGCTGCGAAGCGAACTTGGAGGCGACGAGGAGTATG
 
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JMFS091C09+           AATTC-CTCGGGGTTCTGAGGGTTTCCCTGCGGCTGGGAACTATGGTCATTGTTCTCATT
JMFS135F09+           AATTCGCTCGGGGTTCTGAGGGTTTCCCTGCGGCTGGGAACTATGGTCATTGTTCTCATT
JMFS148G07+           AATTC-CTCGGGGTTCTGAGGGTTTCCCTGCGGCTGGGAACTATGGTCATTGTTCTCATT
                      ____________________________________________________________
consensus             AATTC-CTCGGGGTTCTGAGGGTTTCCCTGCGGCTGGGAACTATGGTCATTGTTCTCATT
 
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JMFS091C09+           GAGTTTACTGCCACGGGAACGGGAGGAGATGGACTCGGAGGTGCGTGGCGACGGTCGCTG
JMFS135F09+           GAGTTTACTGCCACGGGAACGGGAGGAGATGGACTCGGAGGTGCGTGGCCACGGTCGCTG
JMFS148G07+           GAGTTTACTGCCACGGGAACGGGAGGAGATGGACTCGGAGGTGCGTGGCGACGGTCGCTG
                      ____________________________________________________________
consensus             GAGTTTACTGCCACGGGAACGGGAGGAGATGGACTCGGAGGTGCGTGGCGACGGTCGCTG
 
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JMFS091C09+           CTCTTTGGGAAAAGCATTTGGATTCGGGCTCGTAGTTTGGTCGGGCTTCGAGGTTAACGC
JMFS135F09+           CTCTTTGGGAAAAGCATTTGGATTCGGGCTCGTAGTTTGGTCGGGCTTCGAGGTTAACGC
JMFS148G07+           CTCTTTGGGAAAAGCATTTGGATTCGGGCTCGTAGTTTGGTCGGGCTTCGAGGTTAACGC
                      ____________________________________________________________
consensus             CTCTTTGGGAAAAGCATTTGGATTCGGGCTCGTAGTTTGGTCGGGCTTCGAGGTTAACGC
 
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JMFS091C09+           CGACGGCGTCGTCGGGTTATCGCCTTCCTTCAACATCTTTCCATTTCACTCGTCGACGGT
JMFS135F09+           CGACGGCGTCGTCGGGTTATCGCCTTCCTTCAACATCTTTCCATTTCACTCGTCGACGGT
JMFS148G07+           CGACGGCGTCGTCGGGTTATCGCCTTCCTTCAACATCTTTCCATTTCACTCGTCGACGGT
                      ____________________________________________________________
consensus             CGACGGCGTCGTCGGGTTATCGCCTTCCTTCAACATCTTTCCATTTCACTCGTCGACGGT
 
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JMFS091C09+           CATTCAGCCGCTAATTCACAGAAATGGCGGGGAATT                        
JMFS135F09+           CATTCAGCCGCTAATTCACAGAAATGGCGGGGAATTTGAAAAGCCCTAAA          
JMFS148G07+           CATTCAGCCGCTAATTCACAGAAATGGCGGGGAATTGGAAAAGCCCTAAAACACTCTGCT
                      ____________________________________________________________
consensus             CATTCAGCCGCTAATTCACAGAAATGGCGGGGAATTTGAAAAGCCCTAAAACACTCTGCT