Contig 002007:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS062E01Sequence616002007 (4)ref|XP_007210375.1|3e-10hypothetical protein PRUPE_ppa001215mg [Prunus persica] gb|EMJ11574.1| hypotheti
JMFS092G12Sequence622002007 (4)ref|XP_007210375.1|3e-10hypothetical protein PRUPE_ppa001215mg [Prunus persica] gb|EMJ11574.1| hypotheti
JMFS142H04Sequence624002007 (4)ref|XP_007210375.1|3e-10hypothetical protein PRUPE_ppa001215mg [Prunus persica] gb|EMJ11574.1| hypotheti
JMFS159C05Sequence496002007 (4)ref|XP_010936873.1|3e-10PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [El

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           CCATCTCCATCACCGTCGTTGTAATCATCGTCCCTTCCAGCTTCAGGAGTCACGGGATTT
                      ____________________________________________________________
consensus             CCATCTCCATCACCGTCGTTGTAATCATCGTCCCTTCCAGCTTCAGGAGTCACGGGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           ACACAATCACCTTCGGAATCCGGTACGAAATTGGATTGATCATTGGCTTGTTTAGCCTCG
JMFS092G12+                             TCCGGTACGAAATTGGATTGATCATTGGCTTGTTTAGCCTCG
JMFS142H04+                                               TGATCATTGGCTTGTTTAGCCTCG
                      ____________________________________________________________
consensus             ACACAATCACCTTCGGAATCCGGTACGAAATTGGATTGATCATTGGCTTGTTTAGCCTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           GAGTCCGAACTACAGCTGAATTGATGCTTGGAAGCCGGAGACGAGCTTCCGCTGCTGCTT
JMFS092G12+           GAGTCCGAACTACAGCTGAATTGATGCTTGGAAGCCGGAGACGAGCTTCCGCTGCTGCTT
JMFS159C05+            AGTCCGAACTACAGCTGAATTGATGC-TGGAAGCCGGAGACGAGCTTCCGCTGCTGCTT
JMFS142H04+           GAGTCCGAACTACAGCTGAATTGATGCTTGGAAGCCGGAGACGAGCTTCCGCTGCTGCTT
                      ____________________________________________________________
consensus             GAGTCCGAACTACAGCTGAATTGATGCTTGGAAGCCGGAGACGAGCTTCCGCTGCTGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           TTCTTCTGACGCAATGGATACCTGGAGAGAACCGCGGGACTTTTCCGGAACTTCGGAGGT
JMFS092G12+           TTCTTCTGACGCAATGGATACCTGGAGAGAACCGAGGGACTTTTCCGGAACTTCGGAGGT
JMFS159C05+           TTCTTCTGACGCAATGGATACCTGGAGAGAACCGAGGGACTTTTCCGGAACTTCGGAGGT
JMFS142H04+           TTCTTCTGACGCAATGGATACCTGGAGAGAACCGAGGGACTTTTCCGGAACTTCGGAGGT
                      ____________________________________________________________
consensus             TTCTTCTGACGCAATGGATACCTGGAGAGAACCGAGGGACTTTTCCGGAACTTCGGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           TTGGCAGTTGGGAGAGTCAGAGGTTTGACCCTGGGAACATCCTCGAAGCAATCCGTACCG
JMFS092G12+           TTGGCAGTTGGGAGAGTCAGAGGTTTGACCCTGGGAACATCCTCGAAGCAATCCGTACCG
JMFS159C05+           TTGGCAGTTGGGAGAGTCAGAGGTTTGACCCTGGGAACATCCTCGAAGCAATCCGTACCG
JMFS142H04+           TTGGCAGTTGGGAGAGTCAGAGGTTTGACCCTGGGAACATCCTCGAAGCAATCCGTACCG
                      ____________________________________________________________
consensus             TTGGCAGTTGGGAGAGTCAGAGGTTTGACCCTGGGAACATCCTCGAAGCAATCCGTACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           CCATCGTACTCGACGGCGATCGAGTAGTCGAGGTGCTCCTCGTCCGGCAACGGTGCGCCG
JMFS092G12+           CCATCGTACTCGACGGCGATCGAGTAGTCGAGGTGCTCCTCGTCCGGCAACGGTGCGCCG
JMFS159C05+           CCATCGTACTCGACGGCGATCGAGTAGTCGAGGTGCTCCTCGTCCGGCAACGGTGCGCCG
JMFS142H04+           CCATCGTACTCGACGGCGATCGAGTAGTCGAGGTGCTCCTCGTCCGGCAACGGTGCGCCG
                      ____________________________________________________________
consensus             CCATCGTACTCGACGGCGATCGAGTAGTCGAGGTGCTCCTCGTCCGGCAACGGTGCGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           GGAGGCAGCATCCTCCGTAGAAGATCTTCCCAAGCAGTCGACTCCGGCTCAGGCTCCGGC
JMFS092G12+           GGAGGCAGCATCCTCCGTAGAAGATCTTCCCAAGCAGTCGACTCCGGCTCAGGCTCCGGC
JMFS159C05+           GGAGGCAGCATCCTCCGTAGAAGATCTTCCCAAGCAGTCGACTCCGGCTCAGGCTCCGGC
JMFS142H04+           GGAGGCAGCATCCTCCGTAGAAGATCTTCCCAAGCAGTCGACTCCGGCTCAGGCTCCGGC
                      ____________________________________________________________
consensus             GGAGGCAGCATCCTCCGTAGAAGATCTTCCCAAGCAGTCGACTCCGGCTCAGGCTCCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           TCCGGCTCCGGCTCCGACTCCGAACCGGTCATCTTATCGATCGCCGATCAGAAACCAGAG
JMFS092G12+           TCCGGCTCCGGCTCCGACTCCGAACCGGTCATCTTATCGATCGCCGATCAGAAACCAGAG
JMFS159C05+           TCCGGCTCCGGCTCCGACTCCGAACCGGTCATCTTATCGATCGCCGATCAGAAACCAGAG
JMFS142H04+           TCCGGCTCCGGCTCCGACTCCGAACCGGTCATCTTATCGATCGCCGATCAGAAACCAGAG
                      ____________________________________________________________
consensus             TCCGGCTCCGGCTCCGACTCCGAACCGGTCATCTTATCGATCGCCGATCAGAAACCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           AAATCAAAAGAGACTAATTGGAGATGAGACGACAGATTGCGCAGCATAAGAGAGCGTTTA
JMFS092G12+           AAATCAAAAGAGACTAATTGGAGATGAGACGACAGATTGCGCAGCATAAGAGAGCGTTTA
JMFS159C05+           AAATCAAAAGAGACTAATTGGAGATGAGACGACAGATTGCGCAGCATAAGAGAGCGTTTA
JMFS142H04+           AAATCAAAAGAGACTAATTGGAGATGAGACGACAGATTGCGCAGCATAAGAGAGCGTTTA
                      ____________________________________________________________
consensus             AAATCAAAAGAGACTAATTGGAGATGAGACGACAGATTGCGCAGCATAAGAGAGCGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           AAATGGAGTTCCGTGTCGGTTTCGTCGGTTATACTTTCGGTAACTGAAGTTTCAGGAGAG
JMFS092G12+           AAATGGAGTTCCGTGTCGGTTTCGTCGGTTATACTTTCGGTAACTGAAGTTTCAGGAGAG
JMFS159C05+           AAATGGAGTTCCGTGTCGGTTTCGTCGGTTATACTTTCGGTAACTGAAGTTTCAGGAGAG
JMFS142H04+           AAATGGAGTTCCGTGTCGGTTTCGTCGGTTATACTTTCGGTAACTGAAGTTTCAGGAGAG
                      ____________________________________________________________
consensus             AAATGGAGTTCCGTGTCGGTTTCGTCGGTTATACTTTCGGTAACTGAAGTTTCAGGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS062E01+           AGAGAGAGAGAGAGTT                                            
JMFS092G12+           AGAGAGAGAGAGAGTTGGGGTGGAATGCTGGAAAGTAGTTGGTGGATTAGTAGAAGCAAA
JMFS159C05+           AGAGAGAGAGAGAGTT                                            
JMFS142H04+           AGAGAGAGAGAGAGTTGGGGTGGAATGCTGGAAAGTAGTTGGTGGATTAGTAGAAGCAAA
                      ____________________________________________________________
consensus             AGAGAGAGAGAGAGTTGGGGTGGAATGCTGGAAAGTAGTTGGTGGATTAGTAGAAGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS092G12+           GGAGAGTCAATGAGCCGACGAGCGAGAGCCGGTGGGTGCT                    
JMFS142H04+           GGAGAGTCAATGAGCCGACGAGCGAGAGCCGGTGGGTGCTTCGTTGAAGGGCCGAAGAAT
                      ____________________________________________________________
consensus             GGAGAGTCAATGAGCCGACGAGCGAGAGCCGGTGGGTGCTTCGTTGAAGGGCCGAAGAAT