Contig 002006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS141H12Sequence650002006 (3)ref|XP_011071962.1|1e-43PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase WNK3 [
JMFS143C08Sequence619002006 (3)ref|XP_011071962.1|6e-37PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase WNK3 [
JMSF051B21Sequence617002006 (3)ref|XP_009592951.1|6e-79PREDICTED: probable serine/threonine-protein kinase WNK2 [Nicotiana tomentosifo702021609ref|XP_010319025.1|1e-08PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X3 [Solanum ly

Alignment

This contig is upended


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JMSF051B21+                                                 TCATGGCTGTGAAGATAGGAAA
                      ____________________________________________________________
consensus                                                   TCATGGCTGTGAAGATAGGAAA
 
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JMSF051B21+           GCCCCTCTAATATCTGCCTAGACCAATTCTTCAATGCTCTCACTTCAACCTTTTTATGTT
                      ____________________________________________________________
consensus             GCCCCTCTAATATCTGCCTAGACCAATTCTTCAATGCTCTCACTTCAACCTTTTTATGTT
 
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JMSF051B21+           TTTTACGATACTGCCTTAAAGTTCCTGAAGTGAATATTTCAGTAATGAAGTTGATATTCT
                      ____________________________________________________________
consensus             TTTTACGATACTGCCTTAAAGTTCCTGAAGTGAATATTTCAGTAATGAAGTTGATATTCT
 
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JMSF051B21+           CATTCTTTGTGTCAACCCATGAGTTGTAGAACTTGATAATGTTCTTGTGCTTGAGAGTTT
JMFS143C08+                                        AACTTGATAATGTTCTTGTGCTTGAGAGTNT
JMFS141H12+                     GTCAACCCATGAGTTGTAGAACTTGATAATGTTCTTGTGCTTGAGAGTTT
                      ____________________________________________________________
consensus             CATTCTTTGTGTCAACCCATGAGTTGTAGAACTTGATAATGTTCTTGTGCTTGAGAGTTT
 
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JMSF051B21+           TCAGCAAATGGACTTCAGAATAAAGACGCTCCAAATCCACAGAATTCTTCAGCAAATCTG
JMFS143C08+           TCAGCAAATGGACTTCAGAATAAAGACGCTCCAAATCCACAGAATTCTTCAGCAAATCTG
JMFS141H12+           TCAGCAAATGGACTTCAGAATAAAGACGCTCCAAATCCACAGAATTCTTCAGCAAATCTG
                      ____________________________________________________________
consensus             TCAGCAAATGGACTTCAGAATAAAGACGCTCCAAATCCACAGAATTCTTCAGCAAATCTG
 
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JMSF051B21+           TGACCTTAACCTGATTCCAAGCCACTTCAATTCCCTCCCATTCGTCAAATGCTCGATATA
JMFS143C08+           TGACCTTAACCTGATTCCAAGCCACTTCAATTCCCTCCCATTCGTCAAATGCTCGATATA
JMFS141H12+           TGACCTTAACCTGATTCCAAGCCACTTCAATTCCCTCCCATTCGTCAAATGCTCGATATA
                      ____________________________________________________________
consensus             TGACCTTAACCTGATTCCAAGCCACTTCAATTCCCTCCCATTCGTCAAATGCTCGATATA
 
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JMSF051B21+           CTTTCTTGAAGGCTCCTTTTCCTAGCACCTCTTTGTACCGACCATAGCGACCGGAAGGAT
JMFS143C08+           CTTTCTTGAAGGCTCCTTTTCCTAGCACCTCTTTGTACCGACCATAGCGACCGGAAGGAT
JMFS141H12+           CTTTCTTGAAGGCTCCTTTTCCTAGCACCTCTTTGTACCGACCATAGCGACCGGAAGGAT
                      ____________________________________________________________
consensus             CTTTCTTGAAGGCTCCTTTTCCTAGCACCTCTTTGTACCGACCATAGCGACCGGAAGGAT
 
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JMSF051B21+           CTATCTCAACGAACTCGGGTTCGGATTCAGAATCTTCAGGTTCCACCTCCGAACCAGAAT
JMFS143C08+           CTATCTCAACGAACTCGGGTTCGGATTCAGAATCTTCAGGTTCCACCTCCGAACCAGAAT
JMFS141H12+           CTATCTCAACGAACTCGGGTTCGGATTCAGAATCTTCAGGTTCCACCTCCGAACCAGAAT
                      ____________________________________________________________
consensus             CTATCTCAACGAACTCGGGTTCGGATTCAGAATCTTCAGGTTCCACCTCCGAACCAGAAT
 
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JMSF051B21+           CATGGAGCATTCTCTCTATTTTTCTCCAACTCAAATTCAAATCAAATCCACCGAGGGAAA
JMFS143C08+           CATGGAGCATTCTCTCTATTTTTCTCCAACTCAAATTCAAATCAAATCCACCGAGGGAAA
JMFS141H12+           CATGGAGCATTCTCTCTATTTTTCTCCAACTCAAATTCAAATCAAATCCACCGAGGGAAA
                      ____________________________________________________________
consensus             CATGGAGCATTCTCTCTATTTTTCTCCAACTCAAATTCAAATCAAATCCACCGAGGGAAA
 
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JMSF051B21+           TCCAAACCCTATCTTCGCCTTCCTCGAAAATTCCAGATCAGTTCAATTCAAAATAAACAA
JMFS143C08+           TCCAAACCCTATCTTCGCCTTCCTCGAAAATTCCAGATCAGTTCAATTCAAAATAAACAA
JMFS141H12+           TCCAAACCCTATCTTCGCCTTCCTCGAAAATTCCAGATCAGTTCAATTCAAAATAAACAA
                      ____________________________________________________________
consensus             TCCAAACCCTATCTTCGCCTTCCTCGAAAATTCCAGATCAGTTCAATTCAAAATAAACAA
 
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JMSF051B21+           ATCCGAGCAATTAAATTGGAACTCCAGATTATGAAGAGAAAATCCAGACAGTTT      
JMFS143C08+           ATCCGAGCAATTAAATTGGAACTCCAGATTATGAAGAGAAAATCCAGACAGTTTGAGCAA
JMFS141H12+           ATCCGAGCAATTAAATTGGAACTCCAGATTATGAAGAGAAAATCCAGACAGTTTGAGCAA
                      ____________________________________________________________
consensus             ATCCGAGCAATTAAATTGGAACTCCAGATTATGAAGAGAAAATCCAGACAGTTTGAGCAA
 
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JMFS143C08+           ATTATCTCTCACATGTATGCATATATTGCGTATACAAATATAAACGTATTATATACATAT
JMFS141H12+           ATTATCTCTCACATGTATGCATATATTGCGTATACAAATATAAACGTATTATATACATAT
                      ____________________________________________________________
consensus             ATTATCTCTCACATGTATGCATATATTGCGTATACAAATATAAACGTATTATATACATAT
 
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JMFS143C08+           AAATAAATAAATATATATATTTCGATTACATACACAGATCAGTAATCTCAGAAGGAAGAA
JMFS141H12+           AAATAAATAAATATATATATTTCGATTACATACACAGATCAGTAATCTCAGAAGGAAGAA
                      ____________________________________________________________
consensus             AAATAAATAAATATATATATTTCGATTACATACACAGATCAGTAATCTCAGAAGGAAGAA
 
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JMFS143C08+           GATGAAGAAGAAACGTATACAAGAAATGAGGATGTGTAAAGGCCAT              
JMFS141H12+           GATGAAGAAGAAACGTATACAAGAAATGAGGATGTGTAAAGGCCATAGCCTCGTGCCGAA
                      ____________________________________________________________
consensus             GATGAAGAAGAAACGTATACAAGAAATGAGGATGTGTAAAGGCCATAGCCTCGTGCCGAA