Contig 001999:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS116E11+                                                        CCTGAGATTCATACA
                      ____________________________________________________________
consensus                                                          CCTGAGATTCATACA
 
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JMFS116E11+           GTCTTTGTGATTTCATCATATTAACAATCATTGTTGTGAACTTCTGCATTGCAGCCTTGA
JMFS135F06+                      TTCATCATATTAACAATCAGTGTTGTGAACTGCTGCATGGCAGCCTTGA
                      ____________________________________________________________
consensus             GTCTTTGTGATTTCATCATATTAACAATCATTGTTGTGAACTTCTGCATTGCAGCCTTGA
 
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JMFS116E11+           AAGGTCCATTATCTGTCCTGAAGCTGACACCAGGAACATACTTTAGCCAAACTGGGAAAC
JMFS135F06+           AAGGTCCATTATCTGTCCTGAAGCTGACACCAGGAACATACTTTAGCCAAACTGGGAATC
                      ____________________________________________________________
consensus             AAGGTCCATTATCTGTCCTGAAGCTGACACCAGGAACATACTTTAGCCAAACTGGGAATC
 
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JMFS116E11+           CCCCAAAGTTCCATTCAGCGCAGGCATATGGTCCAACTCTGAGATGAACATAAAGTCCAG
JMFS135F06+           CCCCAAAGTTCCATTCAGCGCAGGCATATGGTCCAACTCTGAGATGAGCATAAAGTCCAG
                      ____________________________________________________________
consensus             CCCCAAAGTTCCATTCAGCGCAGGCATATGGTCCAACTCTGAGATGAGCATAAAGTCCAG
 
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JMFS116E11+           CTTGCTGTGCCAACTTAATGAACTTCACTAAATCATACCTCCCTTCGAAATAATATTTGC
JMFS135F06+           CTTGCTGTGCCAACTTAATGAACTTCATTAAATCATACCTCCCTTCGAAATAATATTTGC
                      ____________________________________________________________
consensus             CTTGCTGTGCCAACTTAATGAACTTCATTAAATCATACCTCCCTTCGAAATAATATTTGC
 
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JMFS116E11+           CAGGTTGAGGTTCATGTCCATTCCAGAAAACATATGTCTGGACTACATCCAAGCCTCCTT
JMFS135F06+           CAGGTTTAGGTTCATGTCCATTCCAGAAAACATATGTTTGGACTACATGCAAGCCTCCTT
                      ____________________________________________________________
consensus             CAGGTTTAGGTTCATGTCCATTCCAGAAAACATATGTTTGGACTACATGCAAGCCTCCTT
 
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JMFS116E11+           CTTTTGCTTTCTTAAGAAGATCCGGCCACATCTCAGGGGTACTTCTAGGATAGTGAATGG
JMFS135F06+           CTTGTGCTTTCTTAAGAAGATCCGGCCACATCTCAGGGGTACTTGTAGGATAGTGAATGG
                      ____________________________________________________________
consensus             CTTTTGCTTTCTTAAGAAGATCCGGCCACATCTCAGGGGTACTTGTAGGATAGTGAATGG
 
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JMFS116E11+           ATCCAGAAAGAAGGATCTTTCTTTGGCCATTAATAATGAAAGAATGCTTATCATAAGATA
JMFS135F06+           ATCCAGAAAGAAGGATCTTTCTTTGGCCATTAATAATGAAAGAATGCTTATCATAAGATA
                      ____________________________________________________________
consensus             ATCCAGAAAGAAGGATCTTTCTTTGGCCATTAATAATGAAAGAATGCTTATCATAAGATA
 
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JMFS116E11+           CTGAAGCA                                                    
JMFS135F06+           CTGAAGCAGTTCCAAGAGAAACCCAAGAAGTGCCCAATAACACCACCAGCAATACCTCAA
                      ____________________________________________________________
consensus             CTGAAGCAGTTCCAAGAGAAACCCAAGAAGTGCCCAATAACACCACCAGCAATACCTCAA
 
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JMFS135F06+           TCACATCCCACATTTCATGTTTCCATCCCATGTTACACCATGCGTCCCGAACTGGCCTCG
                      ____________________________________________________________
consensus             TCACATCCCACATTTCATGTTTCCATCCCATGTTACACCATGCGTCCCGAACTGGCCTCG