Contig 001992:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G11Sequence630001992 (7)ref|XP_009605670.1|6e-56PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo796001992 (7)ref|XP_009605670.1|5e-48PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo
JMFS131C09Sequence567001992 (7)ref|XP_007035018.1|3e-24TRAF-like superfamily protein [Theobroma cacao] gb|EOY05944.1| TRAF-like superfa
JMSF003N20Sequence118001992 (7)
JMSF019J10Sequence570002000 (13)emb|CDO99180.1|1e-96unnamed protein product [Coffea canephora]768001992 (7)ref|XP_009605670.1|2e-43PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo
JMSF025L04Sequence713002000 (13)emb|CDO99180.1|3e-131unnamed protein product [Coffea canephora]761001992 (7)ref|XP_009605670.1|3e-51PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo
JMSF051B04Sequence589022268762001992 (7)ref|XP_009605670.1|3e-51PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF011G11- TAC
                      ____________________________________________________________
consensus TAC
 
. : . : . : . : . : . :
JMFF011G11- AAGCCGTCAAACAGTCAAACCCATGATATTTCAGCTCAGTCGCTAGCATGCACATCTGGA
rJMSF025L04+ CGCTAGCATGCACATCTGGA
rJMSF051B04+ CGCTAGCATGCACATCTGGA
                      ____________________________________________________________
consensus AAGCCGTCAAACAGTCAAACCCATGATATTTCAGCTCAGTCGCTAGCATGCACATCTGGA
 
. : . : . : . : . : . :
JMFF011G11- CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
rJMSF025L04+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
rJMSF051B04+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTNGACATTATTAATGACCT
rJMSF019J10+ CGTCCCAGAGTGTACTGGCAGATGAANTTTCCTCATCTTGACATTATTAATGACCT
rJMFF011G11+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
                      ____________________________________________________________
consensus CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
 
. : . : . : . : . : . :
JMFF011G11- GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGAGCCAAGCTTTCAAAGTTT
rJMSF025L04+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMSF051B04+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMSF019J10+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMFF011G11+ GCTGGATGATGATCTTGNAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
                      ____________________________________________________________
consensus GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
 
. : . : . : . : . : . :
JMFF011G11- TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF025L04+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF051B04+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF019J10+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMFF011G11+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
                      ____________________________________________________________
consensus TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
 
. : . : . : . : . : . :
JMFF011G11- AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF025L04+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF051B04+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF019J10+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMFF011G11+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
                      ____________________________________________________________
consensus AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
 
. : . : . : . : . : . :
JMFF011G11- TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF025L04+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF051B04+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF019J10+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMFF011G11+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
JMFS131C09+ CCATTTTGATACTGGTAGAGATATGAT
                      ____________________________________________________________
consensus TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
 
. : . : . : . : . : . :
JMFF011G11- AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF025L04+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF051B04+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF019J10+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMFF011G11+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
JMFS131C09+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
                      ____________________________________________________________
consensus AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
 
. : . : . : . : . : . :
JMFF011G11- ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF025L04+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF051B04+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF019J10+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMFF011G11+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
JMFS131C09+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
                      ____________________________________________________________
consensus ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
 
. : . : . : . : . : . :
JMFF011G11- TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF025L04+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF051B04+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF019J10+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMFF011G11+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
JMFS131C09+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
                      ____________________________________________________________
consensus TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
 
. : . : . : . : . : . :
JMFF011G11- AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF025L04+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF051B04+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF019J10+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMFF011G11+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
JMFS131C09+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
                      ____________________________________________________________
consensus AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
 
. : . : . : . : . : . :
JMFF011G11- AATGAATATATGGGCTGGTGTCCCCATT
rJMSF025L04+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMSF051B04+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMSF019J10+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMFF011G11+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
JMFS131C09+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
                      ____________________________________________________________
consensus AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
 
. : . : . : . : . : . :
rJMSF025L04+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMSF051B04+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMSF019J10+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMFF011G11+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
JMFS131C09+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
                      ____________________________________________________________
consensus AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
 
. : . : . : . : . : . :
rJMSF025L04+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMSF051B04+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMSF019J10+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMFF011G11+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
JMSF003N20- TTGATGTTT
JMFS131C09+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
                      ____________________________________________________________
consensus TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
 
. : . : . : . : . : . :
rJMSF025L04+ GCGAAGTTCATGCTTGTCT
rJMSF051B04+ GCGAAGTTCATGCTTGTCTTGCT
rJMSF019J10+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTC
rJMFF011G11+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
JMSF003N20- GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
JMFS131C09+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
                      ____________________________________________________________
consensus GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
 
. : . : . : . : . : . :
rJMFF011G11+ TATTTACTGATGATATA
JMSF003N20- TATTTACTGATGATATATGATATATGATATATGCCCA
JMFS131C09+ TATTTACTGATGATATATGATATATGATATATGCCCACTTGGTAGTAGGGGTGAGTGATC
                      ____________________________________________________________
consensus TATTTACTGATGATATATGATATATGATATATGCCCACTTGGTAGTAGGGGTGAGTGATC