| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011G11 | Sequence | 630 | 001992 (7) | ref|XP_009605670.1| | 6e-56 | PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo | 796 | 001992 (7) | ref|XP_009605670.1| | 5e-48 | PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo |
| JMFS131C09 | Sequence | 567 | 001992 (7) | ref|XP_007035018.1| | 3e-24 | TRAF-like superfamily protein [Theobroma cacao] gb|EOY05944.1| TRAF-like superfa | |||||
| JMSF003N20 | Sequence | 118 | 001992 (7) | ||||||||
| JMSF019J10 | Sequence | 570 | 002000 (13) | emb|CDO99180.1| | 1e-96 | unnamed protein product [Coffea canephora] | 768 | 001992 (7) | ref|XP_009605670.1| | 2e-43 | PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo |
| JMSF025L04 | Sequence | 713 | 002000 (13) | emb|CDO99180.1| | 3e-131 | unnamed protein product [Coffea canephora] | 761 | 001992 (7) | ref|XP_009605670.1| | 3e-51 | PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo |
| JMSF051B04 | Sequence | 589 | 022268 | 762 | 001992 (7) | ref|XP_009605670.1| | 3e-51 | PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo | |||
This contig is upended
. : . : . : . : . : . :
JMFF011G11- TAC
____________________________________________________________
consensus TAC
. : . : . : . : . : . :
JMFF011G11- AAGCCGTCAAACAGTCAAACCCATGATATTTCAGCTCAGTCGCTAGCATGCACATCTGGA
rJMSF025L04+ CGCTAGCATGCACATCTGGA
rJMSF051B04+ CGCTAGCATGCACATCTGGA
____________________________________________________________
consensus AAGCCGTCAAACAGTCAAACCCATGATATTTCAGCTCAGTCGCTAGCATGCACATCTGGA
. : . : . : . : . : . :
JMFF011G11- CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
rJMSF025L04+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
rJMSF051B04+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTNGACATTATTAATGACCT
rJMSF019J10+ CGTCCCAGAGTGTACTGGCAGATGAANTTTCCTCATCTTGACATTATTAATGACCT
rJMFF011G11+ CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
____________________________________________________________
consensus CGTCCGTCCCAGAGTGTACTGGCAGATGAA-TTTCCTCATCTTGACATTATTAATGACCT
. : . : . : . : . : . :
JMFF011G11- GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGAGCCAAGCTTTCAAAGTTT
rJMSF025L04+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMSF051B04+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMSF019J10+ GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
rJMFF011G11+ GCTGGATGATGATCTTGNAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
____________________________________________________________
consensus GCTGGATGATGATCTTGGAATTGGGATGGCTTCTGGACTGGATCCAAGCTTTCAAAGTTT
. : . : . : . : . : . :
JMFF011G11- TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF025L04+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF051B04+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMSF019J10+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
rJMFF011G11+ TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
____________________________________________________________
consensus TAGCAATGGTCCTCACCATCATCTAGCTCGGCATTTCACCTTCCCAGGTGATGTTGGTTC
. : . : . : . : . : . :
JMFF011G11- AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF025L04+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF051B04+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMSF019J10+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
rJMFF011G11+ AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
____________________________________________________________
consensus AGCTGACCTAGGTCCATCTACTAGCTCTTGTAGGTTAGAGCGGACACTGAGCTATCATGA
. : . : . : . : . : . :
JMFF011G11- TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF025L04+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF051B04+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMSF019J10+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
rJMFF011G11+ TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
JMFS131C09+ CCATTTTGATACTGGTAGAGATATGAT
____________________________________________________________
consensus TAATGGGTTCCTACATAGGTATCCAGGGGGAGGCCATTTTGATACTGGTAGAGATATGAT
. : . : . : . : . : . :
JMFF011G11- AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF025L04+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF051B04+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMSF019J10+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
rJMFF011G11+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
JMFS131C09+ AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
____________________________________________________________
consensus AGCGCAGCCTAGTCCACAAAGTTATGTGAATGGGCAGATGGATGGAATAATTCCTAGCCA
. : . : . : . : . : . :
JMFF011G11- ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF025L04+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF051B04+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMSF019J10+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
rJMFF011G11+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
JMFS131C09+ ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
____________________________________________________________
consensus ATGGCAGATGGTTGCTTCTGATGCATCTTACCTTGGAATGAGGAGTGCTGATAGTGATGT
. : . : . : . : . : . :
JMFF011G11- TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF025L04+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF051B04+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMSF019J10+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
rJMFF011G11+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
JMFS131C09+ TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
____________________________________________________________
consensus TGGCTACCCGTATCATGTCCCTGATTATTCAAACATGGCATGTGGTTTCAATGGTTATAC
. : . : . : . : . : . :
JMFF011G11- AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF025L04+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF051B04+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMSF019J10+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
rJMFF011G11+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
JMFS131C09+ AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
____________________________________________________________
consensus AATGTTCCGGCCTTCAAATGGGCTCTGAAGGAGGGTGGGTCTTATGCAGCTTTGCCTAGG
. : . : . : . : . : . :
JMFF011G11- AATGAATATATGGGCTGGTGTCCCCATT
rJMSF025L04+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMSF051B04+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMSF019J10+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
rJMFF011G11+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
JMFS131C09+ AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
____________________________________________________________
consensus AATGAATATATGGGCTGGTGTCCCCATTGTGATAAAAGAATGCTTTGGTCTTAGATTTGG
. : . : . : . : . : . :
rJMSF025L04+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMSF051B04+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMSF019J10+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
rJMFF011G11+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
JMFS131C09+ AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
____________________________________________________________
consensus AGTGAAGTGTCACCCTAAAAAGGTAAGGCAACATTTTGTAAAGAGTGATTTTGCGTTTTA
. : . : . : . : . : . :
rJMSF025L04+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMSF051B04+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMSF019J10+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
rJMFF011G11+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
JMSF003N20- TTGATGTTT
JMFS131C09+ TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
____________________________________________________________
consensus TGTTCACAACTTTTAGGTTTTAAAAACGCTATCGCCCCCCATATTGGGGATTTGATGTTT
. : . : . : . : . : . :
rJMSF025L04+ GCGAAGTTCATGCTTGTCT
rJMSF051B04+ GCGAAGTTCATGCTTGTCTTGCT
rJMSF019J10+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTC
rJMFF011G11+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
JMSF003N20- GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
JMFS131C09+ GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
____________________________________________________________
consensus GCGAAGTTCATGCTTGTCTTGCTTCTTTTGACCAAATAAGAGCAAATGAGTCTAACCTTT
. : . : . : . : . : . :
rJMFF011G11+ TATTTACTGATGATATA
JMSF003N20- TATTTACTGATGATATATGATATATGATATATGCCCA
JMFS131C09+ TATTTACTGATGATATATGATATATGATATATGCCCACTTGGTAGTAGGGGTGAGTGATC
____________________________________________________________
consensus TATTTACTGATGATATATGATATATGATATATGCCCACTTGGTAGTAGGGGTGAGTGATC