Contig 001989:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS127E12+                                      GGTTATTAAGATATATGCAACAGTTCCTCTATA
JMFS129C04+                                       GTTATTAAGATATATGCAACAGTTCCTCTATA
                      ____________________________________________________________
consensus                                        GGTTATTAAGATATATGCAACAGTTCCTCTATA
 
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JMFS127E12+           AGCTTCTCCAAAAATTTGATACACTACTAGTAGTATCAATAGCTCAAGTCCCTTAACAAA
JMFS129C04+           AGCTTCTCCAAAAATTTGATACACTACTAGTAGTATCAATAGCTCAAGTCCCTTAACAAA
                      ____________________________________________________________
consensus             AGCTTCTCCAAAAATTTGATACACTACTAGTAGTATCAATAGCTCAAGTCCCTTAACAAA
 
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JMFS127E12+           GTGGCTACGGGAGTAGAACCGATAATTATCAGCAAATCTAGCATGAAACACCACAAAACC
JMFS129C04+           GTGGCTACGGGAGTAGAACCGATAATTATCAGCAAATCTAGCATGAAACACCACAAAACC
                      ____________________________________________________________
consensus             GTGGCTACGGGAGTAGAACCGATAATTATCAGCAAATCTAGCATGAAACACCACAAAACC
 
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JMFS127E12+           ACGACCTGTGGGCCTATATTTTGCTCCACCATGAAGGAGTGTCCTTCCATAATAATGTGT
JMFS129C04+           ACGACCTGTGGGCCTATATTTTGCTCCACCATGAAGGAGTGTCCTTCCATAATAATGTGT
                      ____________________________________________________________
consensus             ACGACCTGTGGGCCTATATTTTGCTCCACCATGAAGGAGTGTCCTTCCATAATAATGTGT
 
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JMFS127E12+           CTTAGTTCCCAATGAAAACGTAAAGAACACAGGAGCCAACTGCAATTGCATGAGTATAAA
JMFS129C04+           CTTAGTTCCCAATGAAAACGTAAAGAACACAGGAGCCAACTGCAATTGCATGAGTATAAA
                      ____________________________________________________________
consensus             CTTAGTTCCCAATGAAAACGTAAAGAACACAGGAGCCAACTGCAATTGCATGAGTATAAA
 
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JMFS127E12+           TTCACTAAGTGCAGTGCGAAAGCCCCTTTCTAAGCCAATTTCCATCATCATAGGAAGGGC
JMFS129C04+           TTCACTAAGTGCAGTGCGAAAGCCCCTTTATAAGCCAATTTCCATCATCATAGGAAGGGC
                      ____________________________________________________________
consensus             TTCACTAAGTGCAGTGCGAAAGCCCCTTTCTAAGCCAATTTCCATCATCATAGGAAGGGC
 
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JMFS127E12+           CATTAAAAACCCAATTTGAACAAAGGATTGAGAAGCAAGAGCAACTTGAAGAGACTTATT
JMFS129C04+           CATTAAAAACCCAATTTGAACAAAGGATTGAGAAGCAAGAGCAACTTGAAGAGACTTATT
                      ____________________________________________________________
consensus             CATTAAAAACCCAATTTGAACAAAGGATTGAGAAGCAAGAGCAACTTGAAGAGACTTATT
 
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JMFS127E12+           GTCACGAATTGCTGGCTGGGTAATAAGTCCTTCTTCAAGTCCACTGAGGACAAGATAAAG
JMFS129C04+           GTCACGAATTGCTGGCTGGGTAATAAGTCCTTCTTCAAGTCCACTGAGGACAAGATAAAG
                      ____________________________________________________________
consensus             GTCACGAATTGCTGGCTGGGTAATAAGTCCTTCTTCAAGTCCACTGAGGACAAGATAAAG
 
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JMFS127E12+           GCGTCCGTAAAGGAAGACATAAACAATAAGAACAGTAATCAATGTGCTAAAGTAGAACCC
JMFS129C04+           GCGTCCGTAAAGGAAGACATAAACAATAAGAACAGTAATCAATGTGCTAAAGTAGAACCC
                      ____________________________________________________________
consensus             GCGTCCGTAAAGGAAGACATAAACAATAAGAACAGTAATCAATGTGCTAAAGTAGAACCC
 
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JMFS127E12+           AATAGTAGTGAAATAACACGATAGCATTCGGAAAAAGTCAAATCGGTGCCCAAGTCTGTA
JMFS129C04+           AATAGTAGTGAAATAACACGATAGCATTCGGAAAAAGTCAAATCGGTGCCCAAGTCTGTA
                      ____________________________________________________________
consensus             AATAGTAGTGAAATAACACGATAGCATTCGGAAAAAGTCAAATCGGTGCCCAAGTCTGTA
 
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JMFS127E12+           TAAATCACGACTCACTGTTTGCTCTCCATTACCATTGGCTATCTTGGCTTCAAATAGAGA
JMFS129C04+           TAAATCACGACTCACTGTTTGCTCTCCATTACCATTGGCTATCTTGGCTTCAAATAGAGA
                      ____________________________________________________________
consensus             TAAATCACGACTCACTGTTTGCTCTCCATTACCATTGGCTATCTTGGCTTCAAATAGAGA