Contig 001987:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059C03Sequence623001987 (2)dbj|BAO02538.1|8e-96predicted GNOM-like protein ortholog, partial [Nicotiana alata]
JMFS128F08Sequence617001987 (2)dbj|BAO02538.1|6e-91predicted GNOM-like protein ortholog, partial [Nicotiana alata]

Alignment

This contig is upended


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JMFS059C03+           ATGCAATCCAGTATGTTTTTCCAACTAGTGTGAATATGGTCACCGTAATTGTTTGCTATT
                      ____________________________________________________________
consensus             ATGCAATCCAGTATGTTTTTCCAACTAGTGTGAATATGGTCACCGTAATTGTTTGCTATT
 
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JMFS059C03+           GTGAAAACTGCAGTAGTGGCCATTCTAGCTTTAATGTCATCTCCGAATTTAAGAATAAAC
JMFS128F08+                                                      CGAATTTAAGAATAAAC
                      ____________________________________________________________
consensus             GTGAAAACTGCAGTAGTGGCCATTCTAGCTTTAATGTCATCTCCGAATTTAAGAATAAAC
 
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JMFS059C03+           TCTTCAAAGTAGGATGGAAGCAACAAGGATGTGAATTTGCAAAGTGATACAACCAAATCA
JMFS128F08+           TCTTCAAAGTAGGATGGAAGCAACAAGGATGTGAATTTGCAAAGTGATACAACCAAATCA
                      ____________________________________________________________
consensus             TCTTCAAAGTAGGATGGAAGCAACAAGGATGTGAATTTGCAAAGTGATACAACCAAATCA
 
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JMFS059C03+           TCCAAAACTTCATCGAAATTATAGGCAGCTGTGATCTTAGCAGTGGCCAAGAATCCATCA
JMFS128F08+           TCCAAAACTTCATCGAAATTATAGGCAGCTGTGATCTTAGCAGTGGCCAAGAATCCATCA
                      ____________________________________________________________
consensus             TCCAAAACTTCATCGAAATTATAGGCAGCTGTGATCTTAGCAGTGGCCAAGAATCCATCA
 
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JMFS059C03+           ATACATGTCTGAAAAACATCCTCCTGCTCTGCATGATCAAAAACCACACAGATGGCAGCA
JMFS128F08+           ATACATGTCTGAAAAACATCCTCCTGCTCTGCATGATCAAAAACCACACAGATGGCAGCA
                      ____________________________________________________________
consensus             ATACATGTCTGAAAAACATCCTCCTGCTCTGCATGATCAAAAACCACACAGATGGCAGCA
 
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JMFS059C03+           ATTGTGTGCCTAGACAGTATTGCAAACATTTGACTATCAAGATAAGGTCCTGGTTCACAT
JMFS128F08+           ATTGTGTGCCTAGACAGTATTGCAAACATTTGACTATCAAGATAAGGTCCTGGTTCACAT
                      ____________________________________________________________
consensus             ATTGTGTGCCTAGACAGTATTGCAAACATTTGACTATCAAGATAAGGTCCTGGTTCACAT
 
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JMFS059C03+           ACTATGAATGGGTTAGTATGCTTTGATCTGTGTACTAGACCAATCCAATAGCTTGCCATC
JMFS128F08+           ACTATGAATGGGTTAGTATGCTTTGATCTGTGTACTAGACCAATCCAATAGCTTGCCATC
                      ____________________________________________________________
consensus             ACTATGAATGGGTTAGTATGCTTTGATCTGTGTACTAGACCAATCCAATAGCTTGCCATC
 
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JMFS059C03+           ATAACAGAGACTCCAGCATCTGCATCAGGGGTCATCCGGATCTCATTCTTACATATGGAG
JMFS128F08+           ATAACAGAGACTCCAGCATCTGCATCAGGGGTCATCCGGATCTCATTCTTACATATGGAG
                      ____________________________________________________________
consensus             ATAACAGAGACTCCAGCATCTGCATCAGGGGTCATCCGGATCTCATTCTTACATATGGAG
 
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JMFS059C03+           TGGTAAAGCTCAGAGAGAAACTCTCGTGGAAGGTCATTCCCTCCATTTATTCTCCGATTG
JMFS128F08+           TGGTAAAGCTCAGAGAGAAACTCTCGTGGAAGGTCATTCCCTCCATTTATTCTCCGATTG
                      ____________________________________________________________
consensus             TGGTAAAGCTCAGAGAGAAACTCTCGTGGAAGGTCATTCCCTCCATTTATTCTCCGATTG
 
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JMFS059C03+           TTACGAATGAAATCTTCTTCTGTCATCTTCTTCTTAACCTGAGTATTGTGTTGATCTGTG
JMFS128F08+           TTACGAATGAAATCTTCTTCTGTCATCTTCTTCTTAACCTGAGTATTGTGTTGATCTGTG
                      ____________________________________________________________
consensus             TTACGAATGAAATCTTCTTCTGTCATCTTCTTCTTAACCTGAGTATTGTGTTGATCTGTG
 
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JMFS059C03+           TTAAGCAGTATAAGTGAATACGA                                     
JMFS128F08+           TTAAGCAGTATAAGTGAATACGACAGCAGGAGAGCAGCATCTTTATTTGCCAGAATATTT
                      ____________________________________________________________
consensus             TTAAGCAGTATAAGTGAATACGACAGCAGGAGAGCAGCATCTTTATTTGCCAGAATATTT
 
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JMFS128F08+           GGCGATTGTTCATAATATCTCTCAGAGAATGCTTCAAGCACCCTCTGTATTTTTTGTGAC
                      ____________________________________________________________
consensus             GGCGATTGTTCATAATATCTCTCAGAGAATGCTTCAAGCACCCTCTGTATTTTTTGTGAC