Contig 001985:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051K05Sequence599001985 (5)ref|XP_011089245.1|2e-106PREDICTED: cell division cycle protein 48 homolog [Sesamum indicum]
JMFS128D11Sequence554001985 (5)ref|XP_011089245.1|6e-98PREDICTED: cell division cycle protein 48 homolog [Sesamum indicum]
JMFS130E01Sequence626001985 (5)ref|XP_011089245.1|8e-118PREDICTED: cell division cycle protein 48 homolog [Sesamum indicum]
JMFS148G05Sequence623001985 (5)ref|XP_011089245.1|8e-116PREDICTED: cell division cycle protein 48 homolog [Sesamum indicum]
JMSF049F17Sequence713001985 (5)ref|XP_011089245.1|2e-122PREDICTED: cell division cycle protein 48 homolog [Sesamum indicum]

Alignment

This contig is upended


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JMSF049F17+                                CACCAACATCATCATAGCCAACTTCATCAAGTCTATCCT
                      ____________________________________________________________
consensus                                  CACCAACATCATCATAGCCAACTTCATCAAGTCTATCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049F17+           CATCCTCCCTCTTCACTGGTTCCCCCTCACAGAATATTTCAGTGTCTGGAGCAACAACAC
JMFS130E01+                                       ACAGAATATTTCAGTGTCTGGAGCAACAACAC
JMFS148G05+                                            ATATTTCAGTGTCTGGAGCAACAACAC
                      ____________________________________________________________
consensus             CATCCTCCCTCTTCACTGGTTCCCCCTCACAGAATATTTCAGTGTCTGGAGCAACAACAC
 
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JMSF049F17+           AATATTCCCTAGGATCAGTTTCAATGACCTTGAATTCCACACTTCTCATCCCTCCTCTAA
JMFF051K05+                       GATCAGTTTCAATGACCTTGAATTCCACACTTCTCATCCCTCCTCTAA
JMFS130E01+           AATATTCCCTAGGATCAGTTTCAATGACCTTGAATTCCACACTTCTCATCCCTCCTCTAA
JMFS148G05+           AATATTCCCTAGGATCAGTTTCAATGACCTTGAATTCCACACTTCTCATCCCTCCTCTAA
JMFS128D11+                                                         CATCCCTCCTCTAG
                      ____________________________________________________________
consensus             AATATTCCCTAGGATCAGTTTCAATGACCTTGAATTCCACACTTCTCATCCCTCCTCTAA
 
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JMSF049F17+           CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
JMFF051K05+           CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
JMFS130E01+           CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
JMFS148G05+           CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
JMFS128D11+           CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
                      ____________________________________________________________
consensus             CAAGGAAATGGTCTCCTATCCTCAAAGGTCGATATGCTTCCAAAAAGTAAGGTTTCAAAT
 
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JMSF049F17+           ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
JMFF051K05+           ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
JMFS130E01+           ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
JMFS148G05+           ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
JMFS128D11+           ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
                      ____________________________________________________________
consensus             ATGATTCAAAAAGATCTCCAGTAACCCCTTCAATTGTATCATCTATGGGAAGTATGTGCA
 
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JMSF049F17+           CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
JMFF051K05+           CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
JMFS130E01+           CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
JMFS148G05+           CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
JMFS128D11+           CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
                      ____________________________________________________________
consensus             CGCGCTTCCCATACTTAACATCTGGACACTGGTGTACAGACACAACATCCCCAAGCCGGA
 
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JMSF049F17+           CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
JMFF051K05+           CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
JMFS130E01+           CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
JMFS148G05+           CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
JMFS128D11+           CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
                      ____________________________________________________________
consensus             CCCTCAAATTTGTTCGGACAACTTTGTTCATCCTAATCTTTGGCTCTTCACACGCGTCCT
 
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JMSF049F17+           CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
JMFF051K05+           CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
JMFS130E01+           CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
JMFS148G05+           CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
JMFS128D11+           CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
                      ____________________________________________________________
consensus             CAGCAAGGGCAATAACCACAGTATCTTTCCTTTTCTTGCCCTTAATCAGAATTGTGTCCC
 
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JMSF049F17+           CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
JMFF051K05+           CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
JMFS130E01+           CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
JMFS148G05+           CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
JMFS128D11+           CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
                      ____________________________________________________________
consensus             CGCGGAAGAGCTGGAGCTTCTCCATGGTGGCAGGGTGCAGAGCAACGACAGAGTTATCAT
 
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JMSF049F17+           CGTTAACCGCGTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
JMFF051K05+           CGTTAACCGCCTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
JMFS130E01+           CGTTAACCGCCTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
JMFS148G05+           CGTTAACCGCCTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
JMFS128D11+           CGTTAACCGCCTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
                      ____________________________________________________________
consensus             CGTTAACCGCCTCGTCAACGACAAGCCTATTCGGCGCCTTCTTCCTCTCCAAAATCGCTG
 
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JMSF049F17+           TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
JMFF051K05+           TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
JMFS130E01+           TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
JMFS148G05+           TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
JMFS128D11+           TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
                      ____________________________________________________________
consensus             TAGAGAAATCCCTCTTAGTACTTTTCGAGTCGGATGACTCGGCCTGGTGACTCATCTTCG
 
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JMSF049F17+           ATCTAGA                                                     
JMFF051K05+           ATCTAGA                                                     
JMFS130E01+           ATCTAGATTCTTGAACGGGGAAGACGAAATTGAGATATTTCGCAGGAGAAGAAG      
JMFS148G05+           ATCTAGATTCTTGAACGGGGAAGACGAAATTGAGATATTTCGCAGGAGAAGAAGCG    
JMFS128D11+           ATCTAGATTCTTGAACGGGGAAGACGAAATTGAGATATTTCGCAGGAGAAGAAGCGAGAA
                      ____________________________________________________________
consensus             ATCTAGATTCTTGAACGGGGAAGACGAAATTGAGATATTTCGCAGGAGAAGAAGCGAGAA