Contig 001980:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS039D12Sequence598001980 (6)ref|XP_010662929.1|1e-58PREDICTED: uncharacterized protein LOC100853102 isoform X3 [Vitis vinifera]
JMFS124G11Sequence562001980 (6)ref|XP_010662929.1|2e-43PREDICTED: uncharacterized protein LOC100853102 isoform X3 [Vitis vinifera]
JMSF020H11Sequence706001980 (6)ref|XP_008444806.1|4e-43PREDICTED: uncharacterized protein LOC103488044 isoform X1 [Cucumis melo]787013107 (6)ref|XP_010662928.1|6e-62PREDICTED: uncharacterized protein LOC100853102 isoform X2 [Vitis vinifera]
JMSF030O15Sequence651001980 (6)ref|XP_010662929.1|1e-65PREDICTED: uncharacterized protein LOC100853102 isoform X3 [Vitis vinifera]768013107 (6)ref|XP_010662928.1|9e-54PREDICTED: uncharacterized protein LOC100853102 isoform X2 [Vitis vinifera]
JMSF031O03Sequence607001980 (6)ref|XP_010662929.1|8e-63PREDICTED: uncharacterized protein LOC100853102 isoform X3 [Vitis vinifera]758013107 (6)ref|XP_010662928.1|5e-60PREDICTED: uncharacterized protein LOC100853102 isoform X2 [Vitis vinifera]
JMSF031P03Sequence655001980 (6)ref|XP_010662929.1|5e-67PREDICTED: uncharacterized protein LOC100853102 isoform X3 [Vitis vinifera]741013107 (6)ref|XP_010662928.1|4e-63PREDICTED: uncharacterized protein LOC100853102 isoform X2 [Vitis vinifera]

Alignment

This contig is upended


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JMSF020H11+                                                                    CTT
                      ____________________________________________________________
consensus                                                                      CTT
 
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JMSF031P03+                      GAACATTTGAAGATATGCTTGACACCTCGAAATTGGCTTTTTCAAGATA
JMSF031O03+                                                                CAAGATA
JMSF020H11+           CAGTTGTATCNGAACATTTGAAGATATGCTTGACACCTCGAAATTGGCTTTTTCAAGATA
JMSF030O15+                                                                CAAGATA
                      ____________________________________________________________
consensus             CAGTTGTATCNGAACATTTGAAGATATGCTTGACACCTCGAAATTGGCTTTTTCAAGATA
 
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JMSF031P03+           ATCGTATAGCATCTCAGATATATCCATTACCTCTACCCACTCAACTCTAAACTCCCGGAA
JMSF031O03+           ATCGTATAGCATCTCAGATATATNCATTACCTCTACCCACTCAACTNTNAACTCCCGGAA
JMSF020H11+           ATCGTATAGCATCTCAGATATATCCATTACCTCTACCCACTCAACTCTAAACTCCCGGAA
JMFS039D12+                                 TCCATTACCTCTACCCACTCAACTCTAAACTCCCGGAA
JMSF030O15+           ATCGTATAGCATCTCAGATATATCCATTACCTCTACCCACTCAACTCTAAACTCCCGGAA
                      ____________________________________________________________
consensus             ATCGTATAGCATCTCAGATATATCCATTACCTCTACCCACTCAACTCTAAACTCCCGGAA
 
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JMSF031P03+           AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACAACTTGC
JMSF031O03+           AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACAACTTGC
JMSF020H11+           AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACTACTTGC
JMFS039D12+           AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACAACTTGC
JMSF030O15+           AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACAACTTGC
JMFS124G11+                                                CATATTGCAAGCAAACAACTTGC
                      ____________________________________________________________
consensus             AGGCATGCGGTAAACCTTTACACGCCCCTCGTTGGTGCATATTGCAAGCAAACAACTTGC
 
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JMSF031P03+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
JMSF031O03+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
JMSF020H11+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
JMFS039D12+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
JMSF030O15+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
JMFS124G11+           ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
                      ____________________________________________________________
consensus             ATTTGGAGCAAATCCAATAGGAGACCAAGAAATTGACCTAACACAAGGGCGAATGTCCCG
 
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JMSF031P03+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
JMSF031O03+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
JMSF020H11+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTCTTTTTTTGCCAATCAACCCAA
JMFS039D12+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
JMSF030O15+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
JMFS124G11+           TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
                      ____________________________________________________________
consensus             TGATACACAAGTAGGTAATAAACAGCCAGAAAGCAAGTC-TTTTTTGCCAATCAACCCAA
 
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JMSF031P03+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
JMSF031O03+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
JMSF020H11+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
JMFS039D12+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
JMSF030O15+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
JMFS124G11+           GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
                      ____________________________________________________________
consensus             GATGAAAAGGCTTGCTGGCAGGGATTGTAATAAGACCTCGAGCTCCAAAAAGCTTAGCTG
 
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JMSF031P03+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
JMSF031O03+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTGTCGTCCGACCAGG
JMSF020H11+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
JMFS039D12+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
JMSF030O15+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
JMFS124G11+           GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
                      ____________________________________________________________
consensus             GGTTCAGGATGGAAACAAGGTGACCAGAAGCCACTGCCAACAAATTCTCGTCCGACCAGG
 
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JMSF031P03+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
JMSF031O03+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
JMSF020H11+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
JMFS039D12+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
JMSF030O15+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
JMFS124G11+           CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
                      ____________________________________________________________
consensus             CAATAGCATTGCCGCAGGATGGCGAAGCCACCAGCGCAGTAGCTTGGAACCCCAAAGACA
 
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JMSF031P03+           TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
JMSF031O03+           TTGTTTGTAGACCCAACCTNTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
JMSF020H11+           TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
JMFS039D12+           TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
JMSF030O15+           TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
JMFS124G11+           TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
                      ____________________________________________________________
consensus             TTGTTTGTAGACCCAACCTCTAGACTTTCAGTTCCAAACAACCCAAAGATTCAATCTTTC
 
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JMSF031P03+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
JMSF031O03+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCANTCT
JMSF020H11+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
JMFS039D12+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
JMSF030O15+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
JMFS124G11+           CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
                      ____________________________________________________________
consensus             CCCACATATGGGCTTCTCCACAAATCAAAGATTCAATCTTTCTCCACAAATCTGCAATCT
 
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JMSF031P03+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAG 
JMSF031O03+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAG 
JMSF020H11+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAGA
JMFS039D12+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAGA
JMSF030O15+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAGA
JMFS124G11+           GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAGA
                      ____________________________________________________________
consensus             GCCCAAATCCTCAAAATCGTGGTCCGTGAAGCTGACGGAGCCGCAGAGAGGAGACCGAGA
 
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JMSF020H11+           GAGGACAGAGGCGAGTGGCGAGATGACACCATGTACTTCTA                   
JMFS039D12+           GAGGACAGAGGCGAGTGGCGA                                       
JMSF030O15+           GAGGACAGAGGCGAGTGGCGAGATGACACCATGTACTTCTA                   
JMFS124G11+           GAGGACAGAGGCGAGTGGCGAGATGACACCATGTACTTCTACGCAGGGAGTTGGGAGATG
                      ____________________________________________________________
consensus             GAGGACAGAGGCGAGTGGCGAGATGACACCATGTACTTCTACGCAGGGAGTTGGGAGATG