| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012H17 | Sequence | 548 | 001979 (9) | 752 | 001484 (4) | ||||||
| JMFS007A09 | Sequence | 621 | 001979 (9) | ref|XP_004299699.1| | 5e-08 | PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v | |||||
| JMFS009D10 | Sequence | 579 | 001979 (9) | ref|XP_006338135.1| | 5e-04 | PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t | |||||
| JMFS072D07 | Sequence | 642 | 001979 (9) | ref|NP_001234722.1| | 6e-25 | LeTIR [Solanum lycopersicum] gb|ACY26209.1| LeTIR [Solanum lycopersicum] | |||||
| JMFS119C05 | Sequence | 624 | 001979 (9) | ref|XP_004299699.1| | 2e-11 | PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v | |||||
| JMFS124C03 | Sequence | 565 | 001979 (9) | ||||||||
| JMFS143A03 | Sequence | 624 | 001979 (9) | ref|XP_004299699.1| | 4e-14 | PREDICTED: transport inhibitor response 1-like protein [Fragaria vesca subsp. v | |||||
| JMSF008C24 | Sequence | 392 | 001979 (9) | 778 | 001484 (4) | ||||||
| JMSF020B11 | Sequence | 691 | 001979 (9) | ref|XP_006338135.1| | 1e-20 | PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t | 798 | 001484 (4) | |||
This contig is upended
. : . : . : . : . : . :
JMFS072D07+ GCGCTTGGGCGACACGGCGTAGCAGTTGCCGATGAACACCTCGGATCTGGTCAT
JMFS143A03+ GTCAT
JMSF020B11+ GTAGCAGTTGCCGATGAACACCTCGGATCTGGTCAT
____________________________________________________________
consensus GCGCTTGGGCGACACGGCGTAGCAGTTGCCGATGAACACCTCGGATCTGGTCAT
. : . : . : . : . : . :
JMFS072D07+ GGCCTCCGCCCGGTACCAGGACTTGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
JMFS119C05+ CGGTACCAGGACTTGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
JMFS007A09+ TGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
JMFS143A03+ GGCCTCCGCCCGGTACCAGGACTTGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
JMFS009D10+ GGTCGCGGCGATC
JMSF020B11+ GGCNTCCGCCCGGTACCAGGACTTGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
____________________________________________________________
consensus GGCCTCCGCCCGGTACCAGGACTTGCATACCAGCGACGCGCTGTTCCGGTCGCGGCGATC
. : . : . : . : . : . :
JMFS072D07+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMFS119C05+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMFS007A09+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMFS143A03+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMFS009D10+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMSF020B11+ GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
JMFF012H17+ GAGTACGACGG
JMFS124C03+ CCAACACCTGATCTGAGTACGACGG
____________________________________________________________
consensus GCTGAGGAAGCACAGCACGTTCTCCAGCACATTCTCCAACACCTGATCTGAGTACGACGG
. : . : . : . : . : . :
JMFS072D07+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFS119C05+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFS007A09+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFS143A03+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFS009D10+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMSF020B11+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFF012H17+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
JMFS124C03+ AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
____________________________________________________________
consensus AACGAAGCAGTGATCTCCTCCCCCGCCAATCGAGCAGATGCGGGGTTTAGCCGCACCGCC
. : . : . : . : . : . :
JMFS072D07+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFS119C05+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFS007A09+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFS143A03+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFS009D10+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMSF020B11+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFF012H17+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
JMFS124C03+ ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
____________________________________________________________
consensus ACCGCCGAGATCTGAAGCAGACGACGACGGCCGCGACGGCTCCTCGTCTTCGGACATTTC
. : . : . : . : . : . :
JMFS072D07+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMFS119C05+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMFS007A09+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMFS143A03+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMFS009D10+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMSF020B11+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMFF012H17+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
JMSF008C24+ CGAATTACTAGTCATGTGACTCATCACACGCCC
JMFS124C03+ TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
____________________________________________________________
consensus TGACCGCTCCTCGCTACTACTCGGACTCGAATTACTAGTCATGTGACTCATCACACGCCC
. : . : . : . : . : . :
JMFS072D07+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFS119C05+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFS007A09+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFS143A03+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFS009D10+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMSF020B11+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFF012H17+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMSF008C24+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
JMFS124C03+ GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
____________________________________________________________
consensus GCCCCCCGGCCTCTCTTCAGATTTATCAACTGGATTCCTCTCAACTCTGTCTCAAATCTA
. : . : . : . : . : . :
JMFS072D07+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFS119C05+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFS007A09+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFS143A03+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFS009D10+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMSF020B11+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFF012H17+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMSF008C24+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
JMFS124C03+ TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
____________________________________________________________
consensus TACCAATAATATATATTATTATAATAATTAAAAAAAGAATATCGCCCAGACAGCAATCAA
. : . : . : . : . : . :
JMFS072D07+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFS119C05+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFS007A09+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFS143A03+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFS009D10+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMSF020B11+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFF012H17+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMSF008C24+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
JMFS124C03+ TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
____________________________________________________________
consensus TTTTTTAAAATATTTTTCAGATCATGGAAGAGTTGAGTTGAGGAAGGTGAAGGGCTCTTT
. : . : . : . : . : . :
JMFS072D07+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFS119C05+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFS007A09+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFS143A03+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFS009D10+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMSF020B11+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFF012H17+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMSF008C24+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
JMFS124C03+ GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
____________________________________________________________
consensus GGCTTATAGCAAACCCTGCCGCCTGTGGACTATATCCACTCTTTTTCCTCTCCTTCTTCC
. : . : . : . : . : . :
JMFS072D07+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGG
JMFS119C05+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMFS007A09+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMFS143A03+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMFS009D10+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMSF020B11+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMFF012H17+ GCTTCAACTA-ATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMSF008C24+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
JMFS124C03+ GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
____________________________________________________________
consensus GCTTCAACTACATATAAGCCTGCGATAGGAGGCGGAGGAGCACGGCGGAGAGCGGCGGCG
. : . : . : . : . : . :
JMFS119C05+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGT
JMFS007A09+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTC
JMFS143A03+ GAGGAGGGAGCAAGCATTG
JMFS009D10+ GAGGAGGGAGCAAGCATTGGGATTTC
JMSF020B11+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTCTCCAAAG
JMFF012H17+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTCTCCAAAG
JMSF008C24+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTCTCCAAAG
JMFS124C03+ GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTCTCCAAAGTCCAATTGC
____________________________________________________________
consensus GAGGAGGGAGCAAGCATTGGGATTTCTCCATGGTTATAAGCCTCTCCAAAGTCCAATTGC