Contig 001976:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS021A07+                     TGTAGGCATGAATTCCTCGTAAATATAGGACCCCTCGCGTCTGACTCTTC
                      ____________________________________________________________
consensus                       TGTAGGCATGAATTCCTCGTAAATATAGGACCCCTCGCGTCTGACTCTTC
 
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JMFS021A07+           TAACCTCAGGATGGAATTCACTTGAGCGGTTTCCAACCTTCCGGAACAACTTTTTCATTC
                      ____________________________________________________________
consensus             TAACCTCAGGATGGAATTCACTTGAGCGGTTTCCAACCTTCCGGAACAACTTTTTCATTC
 
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JMFS021A07+           CTCCCCCTGCTGAACTAGGGTAGTATATCATTATACTGTGGTCATCAGCATCAACAGGTT
                      ____________________________________________________________
consensus             CTCCCCCTGCTGAACTAGGGTAGTATATCATTATACTGTGGTCATCAGCATCAACAGGTT
 
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JMFS021A07+           TCTCCACAAAAGGTTTACAGAAGCGTTTCCCGTGAACTTCAACAAAATCTTCTTCCTCAG
                      ____________________________________________________________
consensus             TCTCCACAAAAGGTTTACAGAAGCGTTTCCCGTGAACTTCAACAAAATCTTCTTCCTCAG
 
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JMFS021A07+           CAAAATAATCTAACTCTTGATAGGGTACTTGTCTATTAACACAAGCGTATCTTGGAACTG
JMFS103F09+             AAATAATCCAGCTCTTGATAGCGGACTTCTCTATTAACACAAGCATATCTTGGAACAG
                      ____________________________________________________________
consensus             CAAAATAATCTAGCTCTTGATAGGGTACTTGTCTATTAACACAAGCGTATCTTGGAACTG
 
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JMFS021A07+           GAATTCCACACGTCTCAAGACGCTCATACACTTTCCTTCGATCATGAAGAAGATACTGTA
JMFS103F09+           GAATTCCAAACATCTCAAGCCGCTCATAGACTTTCCTCCTATCATGTAGAAGGTGTTGTG
                      ____________________________________________________________
consensus             GAATTCCACACGTCTCAAGCCGCTCATAGACTTTCCTTCTATCATGTAGAAGGTGTTGTG
 
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JMFS021A07+           GCTCCAATTCATTTACAAGGAAAGGCTTTCTCAACGCAGCATAGGCTTCAGCCTTCTCCA
JMFS103F09+           GCTCCAGCTCATTTACAAGGAAAGGCTTTCTCCATTTAGCATATGACTCAGCCTTCTTCA
JMFS117D06+                   TCATTTACAAGGAAAGGCTTTCTCCATTTAGCATATGACTCAGCCTTCTTCA
                      ____________________________________________________________
consensus             GCTCCAGTTCATTTACAAGGAAAGGCTTTCTCCATTTAGCATATGACTCAGCCTTCTTCA
 
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JMFS021A07+           GAGGATAACCAGTAGAATAGAAGGCAATCAAACAATCACAGATTGGCCAGCTCTCAATTG
JMFS103F09+           AAGGATACCCAGAAGAATAGAAAGCAATAAAGCAATCGCATATTGGCCAGCTTTCAATCG
JMFS117D06+           AAGGATACCCAGAAGAATAGAAAGCAATCAAGCAATCGCATATTGGCCAGCTTTCAATCG
                      ____________________________________________________________
consensus             AAGGATACCCAGAAGAATAGAAAGCAATCAAGCAATCGCATATTGGCCAGCTTTCAATCG
 
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JMFS021A07+           GATCCCCAAGGATAATGTTGTCACCAAAATGCAGAACCTCAAATTCACCAAATGCCTGTA
JMFS103F09+           GATCCTCAAGGATAACCTTGTCACCAAAATGTACAACCTCAAATTCGCCGAATGACTGTA
JMFS117D06+           GATCCTCAAGGATAACCTTGTCACCAAAATGTACAACCTCAAATTCGCCGAATGACTGTA
                      ____________________________________________________________
consensus             GATCCTCAAGGATAACCTTGTCACCAAAATGTACAACCTCAAATTCGCCGAATGACTGTA
 
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JMFS021A07+           ACCTGTCCAGAATCTGCCCCATAGGAGCGGA                             
JMFS103F09+           ATCTGTCCAGAATCTGCCCCATAGGCGCGGAAAA------------------CACCTTCT
JMFS117D06+           ATCTGTCCAGAATCTGCCCCATAGGCGCGGAAAACACCTCGGAGCCGCATTTCACCTTCT
                      ____________________________________________________________
consensus             ATCTGTCCAGAATCTGCCCCATAGGCGCGGAAAACACCTCGGAGCCGCATTTCACCTTCT
 
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JMFS103F09+           TTTCCATTACACATACTCCAATCGTTATCTTCTTCACCACATTATCCTCCGCCTCCATTT
JMFS117D06+           TTTCCATTACACATACTCCAATCGTTATCTTCTTCACCACATTATCCTCCGCCTCCATTT
                      ____________________________________________________________
consensus             TTTCCATTACACATACTCCAATCGTTATCTTCTTCACCACATTATCCTCCGCCTCCATTT
 
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JMFS103F09+           CTCCCTCTCTCCCTCTCTGGATATCTAAACCTATGAATATCTATTTATCTATGTATATCT
JMFS117D06+           CTCCCTCTCTCCCTCTCTGGATATCTAAACCTATGAATATCTATTTATCTATGTATATCT
                      ____________________________________________________________
consensus             CTCCCTCTCTCCCTCTCTGGATATCTAAACCTATGAATATCTATTTATCTATGTATATCT
 
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JMFS103F09+           CTATCGCCTATACGTATATCGGAATGAGTTGAAACGGCTTTAATTTTCTCCCTCCTTTCC
JMFS117D06+           CTATCGCCTATACGTATATCGGAATGAGTTGAAACGGCTTTAATTTTCTCCCTCCTTTCC
                      ____________________________________________________________
consensus             CTATCGCCTATACGTATATCGGAATGAGTTGAAACGGCTTTAATTTTCTCCCTCCTTTCC
 
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JMFS103F09+           GCTCCGCTCAA                                                 
JMFS117D06+           GCTCCGCTCAACTGCTCAAAAACACAGAAACAGGTGAGCTTATGCAAAGCGCGTGTGTAT
                      ____________________________________________________________
consensus             GCTCCGCTCAACTGCTCAAAAACACAGAAACAGGTGAGCTTATGCAAAGCGCGTGTGTAT
 
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JMFS117D06+           AAATATATATAGGTGTGTATGTGTGTGCGCGCTAAAATGAGAAAGACAAAAAGAAAACGG
                      ____________________________________________________________
consensus             AAATATATATAGGTGTGTATGTGTGTGCGCGCTAAAATGAGAAAGACAAAAAGAAAACGG
 
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JMFS117D06+           AAAGAAAATACGACGATATAACACTAGAAATCGTTAACCAGAGATACTGAGATGCACCAA
                      ____________________________________________________________
consensus             AAAGAAAATACGACGATATAACACTAGAAATCGTTAACCAGAGATACTGAGATGCACCAA