Contig 001975:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS117B08+                                                            GGAATGCTGCT
                      ____________________________________________________________
consensus                                                              GGAATGCTGCT
 
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JMFS117B06+                                                            ATAGTAATCAT
JMFS117B08+           CCACCGGTGCCGCACCGCCCCAAACAACCTTAGGCGCAGCCGTAGTAATATAGTAATCAT
                      ____________________________________________________________
consensus             CCACCGGTGCCGCACCGCCCCAAACAACCTTAGGCGCAGCCGTAGTAATATAGTAATCAT
 
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JMFS117B06+           CGTCACTTTCGTCATCCACATCGGCCCACGATTTCGTAGTCAGCGGCGCCGGAGCCCAGA
JMFS117B08+           CGTCACTTTCGTCATCCACATCGGCCCACGATTTCGTAGTCAGCGGCGCCGGAGCCCAGA
                      ____________________________________________________________
consensus             CGTCACTTTCGTCATCCACATCGGCCCACGATTTCGTAGTCAGCGGCGCCGGAGCCCAGA
 
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JMFS117B06+           AAACCTGCGGCTGAGGCTCCTGCTTCGACGAACCGGAAGAAACCTTACTCTTGGAATCCT
JMFS117B08+           AAACCTGCGGCTGAGGCTCCTGCTTCGACGAACCGGAAGAAACCTTACTCTTGGAATCCT
                      ____________________________________________________________
consensus             AAACCTGCGGCTGAGGCTCCTGCTTCGACGAACCGGAAGAAACCTTACTCTTGGAATCCT
 
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JMFS117B06+           TGCTGGACTTCTTCTTCTTCCTGAGAGCTCCGAGCGCCGCGAAACCGTTAGTGCTGTTAA
JMFS117B08+           TGCTGGACTTCTTCTTCTTCCTGAGAGCTCCGAGCGCCGCGAAACCGTTAGTGCTGTTAA
                      ____________________________________________________________
consensus             TGCTGGACTTCTTCTTCTTCCTGAGAGCTCCGAGCGCCGCGAAACCGTTAGTGCTGTTAA
 
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JMFS117B06+           TCACCAACTGATCATCCTTCCTGTTTCCACCACCCACCATTTTTTTTCCTCCTTTCACTC
JMFS117B08+           TCACCAACTGATCATCCTTCCTGTTTCCACCACCCACCATTTTTTTTCCTCCTTTCACTC
                      ____________________________________________________________
consensus             TCACCAACTGATCATCCTTCCTGTTTCCACCACCCACCATTTTTTTTCCTCCTTTCACTC
 
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JMFS117B06+           AGAATCTCAACGCCTCCACCAACACAGCTCGCCGCAGTCGACAGATATCTATATCTACGC
JMFS117B08+           AGAATCTCAACGCCTCCACCAACACAGCTCGCCGCAGTCGACAGATATCTATATCTACGC
                      ____________________________________________________________
consensus             AGAATCTCAACGCCTCCACCAACACAGCTCGCCGCAGTCGACAGATATCTATATCTACGC
 
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JMFS117B06+           GATTCAATCCACGGAGAAACAATCCCTGATTGTGGAATGATCGGATGGAAATCGAAGATG
JMFS117B08+           GATTCAATCCACGGAGAAACAATCCCTGATTGTGGAATGATCGGATGGAAATCGAAGATG
                      ____________________________________________________________
consensus             GATTCAATCCACGGAGAAACAATCCCTGATTGTGGAATGATCGGATGGAAATCGAAGATG
 
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JMFS117B06+           ACAGATTTTCAGGGAAATTCCGGCGAAACAGGAATTTCCGATGAATTGAAGGAAAATGTT
JMFS117B08+           ACAGATTTTCAGGGAAATTCCGGCGAAACAGGAATTTCCGATGAATTGAAGGAAAATGTT
                      ____________________________________________________________
consensus             ACAGATTTTCAGGGAAATTCCGGCGAAACAGGAATTTCCGATGAATTGAAGGAAAATGTT
 
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JMFS117B06+           GAATTGTGGATTGGATGGCGGTTGTAATTTTGGGAGAGAATAGAATCTGTGAGGGTTATA
JMFS117B08+           GAATTGTGGATTGGATGGCGGTTGTAATTTTGGGAGAGAATAGAATCTGTGAGGGTTATA
                      ____________________________________________________________
consensus             GAATTGTGGATTGGATGGCGGTTGTAATTTTGGGAGAGAATAGAATCTGTGAGGGTTATA
 
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JMFS117B06+           CAAAGGAGAACAGTCTGTAATTATTAGGGTTTGATAGAGAGTCGAGTCGGGGAAGATGGA
JMFS117B08+           CAAAGGAGAACAGTCTGTAATTATTAGGGTTTGATAGAGAGTCGAGTCGGGGAAGATGGA
                      ____________________________________________________________
consensus             CAAAGGAGAACAGTCTGTAATTATTAGGGTTTGATAGAGAGTCGAGTCGGGGAAGATGGA