| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS051H10 | Sequence | 595 | 001972 (6) | ref|NP_001233765.1| | 3e-61 | auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au | |||||
| JMFS112A06 | Sequence | 638 | 001972 (6) | ref|NP_001233765.1| | 2e-62 | auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au | |||||
| JMFS116F06 | Sequence | 572 | 001972 (6) | emb|CDP19763.1| | 1e-52 | unnamed protein product [Coffea canephora] | |||||
| JMFS137B09 | Sequence | 505 | 001972 (6) | emb|CDP19763.1| | 4e-39 | unnamed protein product [Coffea canephora] | |||||
| JMFS145H01 | Sequence | 614 | 001972 (6) | ref|NP_001233765.1| | 8e-58 | auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au | |||||
| JMFS162C12 | Sequence | 615 | 001972 (6) | ref|NP_001233765.1| | 3e-57 | auxin response factor 2 [Solanum lycopersicum] ref|XP_010318416.1| PREDICTED: au | |||||
This contig is upended
. : . : . : . : . : . :
JMFS145H01+ TGTACTTGAACATGTGGTGGTGA
JMFS162C12+ ACTTGAACATGTGGTGGTGA
____________________________________________________________
consensus TGTACTTGAACATGTGGTGGTGA
. : . : . : . : . : . :
JMFS051H10+ CATTCTCATCTTGATTCTCTTCCGGCATCAATGT
JMFS145H01+ AGGTAGCACGGTTTCCTTCTTAATTGCATTCTCATCTTGATTCTCTTCCGGCATCAATGT
JMFS162C12+ AGGTAGCACGGTTTCCTTCTTAATTGCATTCTCATCTTGATTCTCTTCCGGCATCAATGT
JMFS116F06+ GCATTCTCATCTTGATTCTCTTCCGGCATCAATGT
JMFS112A06+ GT
____________________________________________________________
consensus AGGTAGCACGGTTTCCTTCTTAATTGCATTCTCATCTTGATTCTCTTCCGGCATCAATGT
. : . : . : . : . : . :
JMFS051H10+ TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
JMFS145H01+ TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
JMFS162C12+ TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
JMFS116F06+ TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
JMFS137B09+ AGCCTTCAACAGGACATTAACCACGCG
JMFS112A06+ TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
____________________________________________________________
consensus TACTTGTGCATAAACCTCATCAGTATCTGCTTCAGCCTTCAACAGGACATTAACCACGCG
. : . : . : . : . : . :
JMFS051H10+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
JMFS145H01+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
JMFS162C12+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
JMFS116F06+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
JMFS137B09+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
JMFS112A06+ GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
____________________________________________________________
consensus GCAGAGGATCTTCCAAGGAAGCTTATAGATTGGCATCTGCTGCTCTGCCACTTGATTAGT
. : . : . : . : . : . :
JMFS051H10+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
JMFS145H01+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
JMFS162C12+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
JMFS116F06+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
JMFS137B09+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAAAGCCAGCTCCTGCTCACG
JMFS112A06+ TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
____________________________________________________________
consensus TGATGCTTCAACCTGCTCGATATGACCTTGCGGGAAATAGAACACCAGCTCCTGCTCACG
. : . : . : . : . : . :
JMFS051H10+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
JMFS145H01+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
JMFS162C12+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
JMFS116F06+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
JMFS137B09+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
JMFS112A06+ TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
____________________________________________________________
consensus TGGCACTGTCACCAGCGGCCCGGCACAAGCCCGCCATAGCTCCGTGTACAACGCTCTCTC
. : . : . : . : . : . :
JMFS051H10+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
JMFS145H01+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
JMFS162C12+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
JMFS116F06+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
JMFS137B09+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
JMFS112A06+ AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
____________________________________________________________
consensus AACATCTTTACCGGCTCCGGAGACACTCCGACCACCGTCAGGAGGCGGCGCACACGAGCC
. : . : . : . : . : . :
JMFS051H10+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
JMFS145H01+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
JMFS162C12+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
JMFS116F06+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
JMFS137B09+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
JMFS112A06+ ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
____________________________________________________________
consensus ACAACTCGACTCAGCGTAACCCCTGGCCGCCGTAACCTCTGAAGTAGCCATTTCCGAACC
. : . : . : . : . : . :
JMFS051H10+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
JMFS145H01+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
JMFS162C12+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
JMFS116F06+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
JMFS137B09+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
JMFS112A06+ TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
____________________________________________________________
consensus TTCGAGGAGTTTCTTCGCAAGATACGGATCTCACATCCCCGACGCGATTCTCCAAAAACA
. : . : . : . : . : . :
JMFS051H10+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
JMFS145H01+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
JMFS162C12+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
JMFS116F06+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
JMFS137B09+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
JMFS112A06+ GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
____________________________________________________________
consensus GATGTTCAGTCAGACACAACACCAAAATCACCTCAATCAACTGGAAATTCTCTAGATTCC
. : . : . : . : . : . :
JMFS051H10+ AAAGCTTTCTCACTCTAGTTTC
JMFS145H01+ AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGT
JMFS162C12+ AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGTGTGT
JMFS116F06+ AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGTGTGT
JMFS137B09+ AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGTGTGT
JMFS112A06+ AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGTGTGTGTGCA
____________________________________________________________
consensus AAAGCTTTCTCACTCTAGTTTCTCTCTCTACATCAGCTTCGCTCTGTGTGTGTGTGTGCA