Contig 001963:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048M17+                                                  TCCCTTAGCGCTTATAGACGC
JMSF049A23+                                                               ATAGACGC
                      ____________________________________________________________
consensus                                                    TCCCTTAGCGCTTATAGACGC
 
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JMSF048M17+           ACTTAAGTCAATGCTCACACCAAAGCCATTTGCACGAATTGGAAGAGTGGCTAGAGACCG
JMSF049A23+           ACTTAAGTCAATGCTCACACCAAAGCCATTTGCACGAATTGGAAGAGTGGCTAGAGACCG
                      ____________________________________________________________
consensus             ACTTAAGTCAATGCTCACACCAAAGCCATTTGCACGAATTGGAAGAGTGGCTAGAGACCG
 
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JMSF048M17+           CTCATTTGCGCAACGACGAAGATGGGCTCGTTTTTTATACCAATAGACACAAAAGAACGC
JMSF049A23+           CTCATTTGCGCAACGACGAAGATGGGCTCGTTTTTTATACCAATAGACACAAAAGAACGC
                      ____________________________________________________________
consensus             CTCATTTGCGCAACGACGAAGATGGGCTCGTTTTTTATACCAATAGACACAAAAGAACGC
 
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JMSF048M17+           AAGCGATGCTAGAAGAATTCCAACCGCCACACCAACTGAGACGCCAATAATAACTAAATC
JMSF049A23+           AAGCGATGCTAGAAGAATTCCAACCGCCACACCAACTGAGACGCCAATAATAACTAAATC
JMFS099H05+                                                               ACTAAATC
                      ____________________________________________________________
consensus             AAGCGATGCTAGAAGAATTCCAACCGCCACACCAACTGAGACGCCAATAATAACTAAATC
 
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JMSF048M17+           CGCTTTATGGACCATTCTAACGCTTTTTTCCCACAAGCAGGCAATGAGCTCATCTTGCAG
JMSF049A23+           CGCTTTATGGACCATTCTAACGCTTTTTTCCCACAAGCAGGCAATGAGCTCATCTTGCAG
JMFS099H05+           CGCTTTATGGACCATTCTAACGCTTTTTTCCCACAAGCAGGCAATGAGCTCATCTGGCAG
                      ____________________________________________________________
consensus             CGCTTTATGGACCATTCTAACGCTTTTTTCCCACAAGCAGGCAATGAGCTCATCTTGCAG
 
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JMSF048M17+           GGCTTCGCTAAAGTAAAAAACAAATAAACATGGATTGGGAGTTAACTCCACTATCCAAGA
JMSF049A23+           GGCTTCGCTAAAGTAAAAAACAAATAAACATGGATTGGGAGTTAACTCCACTATCCAAGA
JMFS099H05+           GGCTTCGCTAAAGTAAAAAACAAATAAACATGGATTGGGAGTTAACTCCACTATCCAAGA
                      ____________________________________________________________
consensus             GGCTTCGCTAAAGTAAAAAACAAATAAACATGGATTGGGAGTTAACTCCACTATCCAAGA
 
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JMSF048M17+           AGGCCAATAAACCACTCCGCCCAGGAGTCAAACTTGGAACTTTGTGATTATCGAGCCAAC
JMSF049A23+           AGGCCAATAAACCACTCCGCCCAGGAGTCAAACTTGGAACTTTGTGATTATCGAGCCAAC
JMFS099H05+           AGGCCAATAAACCACTCCGCCCAGGAGTCAAACTTGGAACTTTGTGATTATCGAGCCAAC
                      ____________________________________________________________
consensus             AGGCCAATAAACCACTCCGCCCAGGAGTCAAACTTGGAACTTTGTGATTATCGAGCCAAC
 
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JMSF048M17+           AATCTGACCAATTTGACAGGGGGTTGCCTTACTTTGCTTTCACTTATGAGC         
JMSF049A23+           AATCTGACCAATTTGACAGGGGGTTGCCTTACTTTGCTTTCACTTATGAGC         
JMFS099H05+           AATCTGACCAATTTGACAGGGGGTTGCCTTACTTTGCTTTCACTTATGAGCTGCACAATA
                      ____________________________________________________________
consensus             AATCTGACCAATTTGACAGGGGGTTGCCTTACTTTGCTTTCACTTATGAGCTGCACAATA
 
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JMFS099H05+           TATAAAAGCAATTTACCAAGAATTGTTAGGTCAAATTATAACTGGCACCAGTTGGATCAG
                      ____________________________________________________________
consensus             TATAAAAGCAATTTACCAAGAATTGTTAGGTCAAATTATAACTGGCACCAGTTGGATCAG
 
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JMFS099H05+           AAATTCCCACTCTTTATTCTCCTCCTGGCCATCATCACAAGCTCAATTCCCAGTTACCTC
                      ____________________________________________________________
consensus             AAATTCCCACTCTTTATTCTCCTCCTGGCCATCATCACAAGCTCAATTCCCAGTTACCTC
 
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JMFS099H05+           AGAAAAATCTAGTAAATCATCAAACTTATTCAAACAAGAACTGTTTTTTCCAACACCCAT
                      ____________________________________________________________
consensus             AGAAAAATCTAGTAAATCATCAAACTTATTCAAACAAGAACTGTTTTTTCCAACACCCAT
 
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JMFS099H05+           CAACCCAGAAAAGCAAACAAAAAGAAAAACACATAAACCAGCAGAAAATAACAGATATCA
                      ____________________________________________________________
consensus             CAACCCAGAAAAGCAAACAAAAAGAAAAACACATAAACCAGCAGAAAATAACAGATATCA
 
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JMFS099H05+           CCCACCATAGAGCAAACAGAAACAAAGAAAATCCAGAGAAACAATAACTAAAATTTGAAC
                      ____________________________________________________________
consensus             CCCACCATAGAGCAAACAGAAACAAAGAAAATCCAGAGAAACAATAACTAAAATTTGAAC
 
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JMFS099H05+           AGAAACACAAAAGATGATCAAGAATCGAGATAAACCCAACACACTAACATACCAAATCAG
                      ____________________________________________________________
consensus             AGAAACACAAAAGATGATCAAGAATCGAGATAAACCCAACACACTAACATACCAAATCAG