Contig 001962:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS010A10+                     GACATGTTTCCTCAATAGTTTGGCAGAAAATACAACCCTCTTGTCTGCAC
                      ____________________________________________________________
consensus                       GACATGTTTCCTCAATAGTTTGGCAGAAAATACAACCCTCTTGTCTGCAC
 
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JMFS010A10+           TAGGGCATCCATAGCCAACAAAAATTTGAAGATCATGTCTTGACAATGCCCTTAAGATGT
JMFS098H05+                                                       AATGCCCTTAAGATGT
                      ____________________________________________________________
consensus             TAGGGCATCCATAGCCAACAAAAATTTGAAGATCATGTCTTGACAATGCCCTTAAGATGT
 
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JMFS010A10+           CAAATCTATCGCGACCAAAGTTGAGAACAGCAGTCTGAACAGTCTTCCAATCCCTAGTAA
JMSF040O17+                                                               CCTAGTAA
JMFS098H05+           CAAATCTATCGCGACCAAAGTTGAGAACAGCAGTCTGAACAGTCTTCCAATCCCTAGTAA
                      ____________________________________________________________
consensus             CAAATCTATCGCGACCAAAGTTGAGAACAGCAGTCTGAACAGTCTTCCAATCCCTAGTAA
 
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JMFS010A10+           AATCGAACCCTTCCTGTTCTACGGCATCGGAAACACTAAAGCCCAAGTCTTCAATCATTT
JMSF040O17+           AATCGAACCCTTCCTGTTCTACGGCATCGGAAACACTAAAGCCCAAGTCTTCAATCATTT
JMFS098H05+           AATCGAACCCTTCCTGTTCTACGGCATCGGAAACACTAAAGCCCAAGTCTTCAATCATTT
                      ____________________________________________________________
consensus             AATCGAACCCTTCCTGTTCTACGGCATCGGAAACACTAAAGCCCAAGTCTTCAATCATTT
 
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JMFS010A10+           TATCCTCGTCTTTCCTCTTATGATCGAAGTAATTCTGCTGCACCAGCCTCTCCATCAGCT
JMSF040O17+           TATCCTCGTCTTTCCTCTTATGATCGAAGTAATTCTGCTGCACCAGCCTCTCCATCAGCT
JMFS098H05+           TATCCTCGTCTTTCCTCTTATGATCGAAGTAATTCTGCTGCACCAGCCTCTCCATCAGCT
                      ____________________________________________________________
consensus             TATCCTCGTCTTTCCTCTTATGATCGAAGTAATTCTGCTGCACCAGCCTCTCCATCAGCT
 
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JMFS010A10+           CAATCCACTCCGGCCAAGGGTGAACCAACTCCACCTCCTTATCCATCAACCCCCCGCCGT
JMSF040O17+           CAATCCACTCCGGCCAAGGGTGAACCAACTCCACCTCCTTATCCATCAACCCCCCGCCGT
JMFS098H05+           CAATCCACTCCGGCCAAGGGTGAACCAACTCCACCTCCTTATCCATCAACCCCCCGCCGT
                      ____________________________________________________________
consensus             CAATCCACTCCGGCCAAGGGTGAACCAACTCCACCTCCTTATCCATCAACCCCCCGCCGT
 
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JMFS010A10+           GACCAACAAGAGAACACCTCTCCTTCGACTTATCAGGAACCGAATCGACATCTGAAACCT
JMSF040O17+           GACCAACAAGAGAACACCTCTCCTTCGACTTATCAGGAACCGAATCGACATCTGAAACCT
JMFS098H05+           GACCAACAAGAGAACACCTCTCCTTCGACTTATCAGGAACCGAATCGACATCTGAAACCT
                      ____________________________________________________________
consensus             GACCAACAAGAGAACACCTCTCCTTCGACTTATCAGGAACCGAATCGACATCTGAAACCT
 
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JMFS010A10+           CGCTCTGAGTTTGCGATTGCGGCGGCTGGGGTTGGGACTGTGATAGAGTGGTGGACTTCT
JMSF040O17+           CGCTCTGAGTTTGCGATTGCGGCGGCTGGGGTTGGGACTGTGATAGAGTGGTGGACTTCT
JMFS098H05+           CGCTCTGAGTTTGCGATTGCGGCGGCTGGGGTTGGGACTGTGATAGAGTGGTGGACTTCT
                      ____________________________________________________________
consensus             CGCTCTGAGTTTGCGATTGCGGCGGCTGGGGTTGGGACTGTGATAGAGTGGTGGACTTCT
 
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JMFS010A10+           TGGATTCGCGCCAAGCGCGTATGCGTTGGAGGGTCTGGTCTTTCTCGGCGTGCTCTTTCT
JMSF040O17+           TGGATTCGCGCCAAGCGCGTATGCGTTGGAGGGTCTGGTCTTTCTCGGCGTGCTCTTTCT
JMFS098H05+           TGGATTCGCGCCAAGCGCGTATGCGTTGGAGGGTCTGGTCTTTCTCGGCGTGCTCTTTCT
                      ____________________________________________________________
consensus             TGGATTCGCGCCAAGCGCGTATGCGTTGGAGGGTCTGGTCTTTCTCGGCGTGCTCTTTCT
 
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JMFS010A10+           CGATGGCGTCAATTTGATCAAAGACGAAGCGCATCCGGGCGGAGAGAGACGAGGGTTCAG
JMSF040O17+           CGATGGCGTCAATTTGATCAAAGACGAAGCGCATCCGGGCGGAGAGAGACGAGGGTTCAG
JMFS098H05+           CGATGGCGTCAATTTGATCAAAGACGAAGCGCATCCGGGCGGAGAGAGACGAGGGTTCAG
                      ____________________________________________________________
consensus             CGATGGCGTCAATTTGATCAAAGACGAAGCGCATCCGGGCGGAGAGAGACGAGGGTTCAG
 
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JMFS010A10+           AGGGCGTGGGGCC                                               
JMSF040O17+           AGGGCGTGGGGCCAGAGGTGGACGGGGTGGAGGAGAGAGAAGAAAGGAGTTTTAGAGAAA
JMFS098H05+           AGGGCGTGGGGCCAGAGGTGGACGGGGTGGAGGAGAGAGAAGAAAGGAGTTTTAGAGAAA
                      ____________________________________________________________
consensus             AGGGCGTGGGGCCAGAGGTGGACGGGGTGGAGGAGAGAGAAGAAAGGAGTTTTAGAGAAA
 
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JMSF040O17+           GAAAGTTGAAGGGTTTAGGGTTTTGGGAAAAGAGGCGTCTGCGGAGGAGAACAGAGGT  
JMFS098H05+           GAAAGTTGAAGGGTTTAGGGTTTTGGGAAAAGAGGCGTCTGCGGAGGAGAACAGAGGTGG
                      ____________________________________________________________
consensus             GAAAGTTGAAGGGTTTAGGGTTTTGGGAAAAGAGGCGTCTGCGGAGGAGAACAGAGGTGG