Contig 001952:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN039K02-                                                    GAGAGAGAGAGAACTAGTC
                      ____________________________________________________________
consensus                                                      GAGAGAGAGAGAACTAGTC
 
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JMFN039K02-           TCGAGXXXXXXXXXXXXXXXXXXXXXXXXAATTCAAGCACTTCAAACCATTAGTTTATTA
JMFS086F10+                                        AATTCAAGCACTTCAAACCATTAGTTTATTA
                      ____________________________________________________________
consensus             TCGAGNNNNNNNNNNNNNNNNNNNNNNNNAATTCAAGCACTTCAAACCATTAGTTTATTA
 
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JMFN039K02-           TTATTTATGATATAATCACAACAACGACAATAAACAAACACATTTGGAGACGACACATTG
JMFS086F10+           TTATTTATGATATAATCACAACAACGACAATAAACAAACACATTTGGAGACGACACATTG
                      ____________________________________________________________
consensus             TTATTTATGATATAATCACAACAACGACAATAAACAAACACATTTGGAGACGACACATTG
 
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JMFN039K02-           ACACACAACAAACACAGATGTTCGAATGGTCGAACTTATTATTTGCATATATGACGGGGC
JMFS086F10+           ACACACAACAAACACAGATGTTCGAATGGTCGAACTTATTATTTGCATATATGACGGGGC
                      ____________________________________________________________
consensus             ACACACAACAAACACAGATGTTCGAATGGTCGAACTTATTATTTGCATATATGACGGGGC
 
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JMFN039K02-           GAATAAAAAGACAGCCAGCAGGCTAGCAGTCTCCGATCAAGCAGAATCAGGCAGCGACAA
JMFS086F10+           GAATAAGAAGACAGCCAGCAGGCTAGCAGTCTCCGATCAAGCAGAATCAGGCAGCGACAA
                      ____________________________________________________________
consensus             GAATAAGAAGACAGCCAGCAGGCTAGCAGTCTCCGATCAAGCAGAATCAGGCAGCGACAA
 
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JMFN039K02-           TCTTGGTTGTTTCGGTAGTGTCCTCCTTGCGATGGTCATTGACATTACCAACAAAAGTAC
JMFS086F10+           TCTTGGTTGTTTCGGTAGTGTCCTCCTTGCGATGGTCATTGACATTACCAACAAAAGTAC
                      ____________________________________________________________
consensus             TCTTGGTTGTTTCGGTAGTGTCCTCCTTGCGATGGTCATTGACATTACCAACAAAAGTAC
 
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JMFN039K02-           CACACCCACCGCAACCACCACCACATCCGCTACCACACCCACCACTTTTCAACCCATATC
JMFS086F10+           CACACCCACCGCAACCACCACCACATCCGCTACCACACCCACCACTTTTCAACCCATATC
                      ____________________________________________________________
consensus             CACACCCACCGCAACCACCACCACATCCGCTACCACACCCACCACTTTTCAACCCATATC
 
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JMFN039K02-           CAGACTCTCCACCTCCATCCTCCTTGTGATGGTTACTGACATTAGCAACACTGCCACCAC
JMFS086F10+           CAGACTCTCCACCTCCATCCTCCTTGTGATGGTTACTGACATTAGCAACACTGCCACCAC
                      ____________________________________________________________
consensus             CAGACTCTCCACCTCCATCCTCCTTGTGATGGTTACTGACATTAGCAACACTGCCACCAC
 
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JMFN039K02-           AACCACCACCGCTACCACAACCGCCACCACACCCACCACTTTTCAACATGCTACCACAAC
JMFS086F10+           AACCACCACCGCTACCACAACCGCCACCACACCCACCACTTTTCAACATGCTACCACAAC
                      ____________________________________________________________
consensus             AACCACCACCGCTACCACAACCGCCACCACACCCACCACTTTTCAACATGCTACCACAAC
 
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JMFN039K02-           CGCCCCCACACCCGCCACC                                         
JMFS086F10+           CGCCCCCACACCCGCCACCACAACCGCCCCCACACCCGCCACCACAACCGCCACTTTTCA
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consensus             CGCCCCCACACCCGCCACCACAACCGCCCCCACACCCGCCACCACAACCGCCACTTTTCA