Contig 001946:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047I16Sequence424001946 (5)gb|ADB02894.1|3e-39multicystatin/cysteine protease inhibitor [Jatropha curcas] gb|KDP34555.1| hypot
JMFN017N01Sequence474001946 (5)gb|ADB02894.1|9e-42multicystatin/cysteine protease inhibitor [Jatropha curcas] gb|KDP34555.1| hypot
JMFN028N14Sequence454001946 (5)gb|ADB02894.1|1e-41multicystatin/cysteine protease inhibitor [Jatropha curcas] gb|KDP34555.1| hypot
JMFS015G07Sequence455001946 (5)gb|ADB02894.1|1e-41multicystatin/cysteine protease inhibitor [Jatropha curcas] gb|KDP34555.1| hypot
JMFS082E06Sequence506001946 (5)gb|ADB02894.1|3e-41multicystatin/cysteine protease inhibitor [Jatropha curcas] gb|KDP34555.1| hypot

Alignment

This contig is upended


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JMFN017N01+                                             GATAAACACACAATTAACATTCATTA
JMFS015G07+                                                       CAATTAACATTCATTA
JMFN028N14+                                             GATAAACACACAATTAACATTCATTA
JMFS082E06+                                             GATAAACACACAATTAACATTCATTA
                      ____________________________________________________________
consensus                                               GATAAACACACAATTAACATTCATTA
 
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JMFN017N01+           ATAATCATAGCACATACATACAGGCTTTAGGATGTGTTGAGAGTATAACAGTAGATCAGA
JMFS015G07+           ATAATCATAGCACATACATACAGGCTTTAGGATGTGTTGAGAGTATAACAGTAGATCAGA
JMFN028N14+           ATAATCATAGCACATACATACAGGCTTTAGGATGTGTTGAGAGTATAACAGTAGATCAGA
JMFF047I16+                                         GATGTGTTGAGAGTATACCAGTAGATCAGA
JMFS082E06+           ATAATCATAGCACATACATACAGGCTTTAGGATGTGTTGAGAGTATAACAGTAGATCAGA
                      ____________________________________________________________
consensus             ATAATCATAGCACATACATACAGGCTTTAGGATGTGTTGAGAGTATAACAGTAGATCAGA
 
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JMFN017N01+           CTTTATTTTTTGCAAGTACTACTACAGAGAAGTTGATTAGCAGTGGCATTGGTTTAGGCA
JMFS015G07+           CTTTATTTTTTGCAAGTACTACTACAGAGAAGTTGATTAGCAGTGGCATTGGTTTAGGCA
JMFN028N14+           CTTTATTTTTTGCAAGTACTACTACAGAGAAGTTGATTAGCAGTGGCATTGGTTTAGGCA
JMFF047I16+           CTTTATTTTTTGCAAGTACTACTACAGAGAAGTGATTTAGCAGTGGCATTGGTTTAGGCA
JMFS082E06+           CTTTATTTTTTGCAAGTACTACTACAGAGAAGTTGATTAGCAGTGGCATTGGTTTAGGCA
                      ____________________________________________________________
consensus             CTTTATTTTTTGCAAGTACTACTACAGAGAAGTTGATTAGCAGTGGCATTGGTTTAGGCA
 
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JMFN017N01+           TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCACACC
JMFS015G07+           TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCACACC
JMFN028N14+           TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCACACC
JMFF047I16+           TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCCCACC
JMFS082E06+           TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCACACC
                      ____________________________________________________________
consensus             TTACCAACGAGATTGAACTCTTGCACTTCCTTGAAGTTCTCCCATGGCTTCTCCCACACC
 
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JMFN017N01+           TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
JMFS015G07+           TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
JMFN028N14+           TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
JMFF047I16+           TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
JMFS082E06+           TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
                      ____________________________________________________________
consensus             TTAGCTTCATACACCTTTTTCTGACCCCCATGGGCTGCCTCCAGCGTAATATAATGCATT
 
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JMFN017N01+           GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
JMFS015G07+           GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
JMFN028N14+           GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
JMFF047I16+           GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
JMFS082E06+           GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
                      ____________________________________________________________
consensus             GTCCCAGCAACCACCTGCTGTTTCACATTCACAACCTTCCCAAACTCCAAATTCGCATTC
 
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JMFN017N01+           GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
JMFS015G07+           GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
JMFN028N14+           GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
JMFF047I16+           GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
JMFS082E06+           GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
                      ____________________________________________________________
consensus             GCTTTCTTATTATGTTCAGAGATGGCGAAGCGAGCGAGATTATCAAATTCGATGCTGTTT
 
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JMFN017N01+           TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
JMFS015G07+           TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
JMFN028N14+           TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
JMFF047I16+           TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
JMFS082E06+           TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
                      ____________________________________________________________
consensus             TGGAATCCCTTGACTTCGGAAACGCTTCCGGTCATCGCCATAGCTTTGCAAGAAAAATCG
 
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JMFN017N01+           CGGCGAAGTGTGTGCTTTCTACGGTGTC                                
JMFS015G07+           CGGCGAAGTGTGTGCTTTC                                         
JMFN028N14+           CGGCGAAG                                                    
JMFF047I16+           CGGCGAAGTGTGTGCTTTCTACGGTGTC                                
JMFS082E06+           CGGCGAAGTGTGTGCTTTCTACGGTGTCTGCGTCGGAGCTGGAGTAGAGAGAGAGTGTGT
                      ____________________________________________________________
consensus             CGGCGAAGTGTGTGCTTTCTACGGTGTCTGCGTCGGAGCTGGAGTAGAGAGAGAGTGTGT