Contig 001943:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF019A14+                                                  GTCTTTGGCGTTTAATGAGGG
                      ____________________________________________________________
consensus                                                    GTCTTTGGCGTTTAATGAGGG
 
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JMSF019A14+           GGGGAATATATATATTAAAAGGGTTTAAAACAGCTTTTAAAAAGGAGAAGCAAAGAAGAA
                      ____________________________________________________________
consensus             GGGGAATATATATATTAAAAGGGTTTAAAACAGCTTTTAAAAAGGAGAAGCAAAGAAGAA
 
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JMSF019A14+           GCTTCAATCTAAACGCTAAAGAGAAATCCAATTGAAACCAGCAACTGACAAATGGTTTGA
JMFS077C02+                               GAGAAATCCAATTGAAACCAGCAACTGACAAATGGTTTGA
                      ____________________________________________________________
consensus             GCTTCAATCTAAACGCTAAAGAGAAATCCAATTGAAACCAGCAACTGACAAATGGTTTGA
 
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JMSF019A14+           CTGATAAATTGCCATGCCGATAAATGGTATTCGCACGAATCTTATACAGTAGTGCAAAAA
JMFS077C02+           CTGATAAATTGCCATGCCGATAAATGGTATTCGCACGAATCTTATACAGTAGTGCAAAAA
                      ____________________________________________________________
consensus             CTGATAAATTGCCATGCCGATAAATGGTATTCGCACGAATCTTATACAGTAGTGCAAAAA
 
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JMSF019A14+           GACCAAAGAAAACACGGCGCAGCAGCCGGGGCAAGGACGGAGGGTGGGGGGAAAAGGCTC
JMFS077C02+           GACCAAAGAAAACACGGCGCAGCAGCCGGGGCAAGGACGGAGGGTGGGGGGAAAAGGCTC
                      ____________________________________________________________
consensus             GACCAAAGAAAACACGGCGCAGCAGCCGGGGCAAGGACGGAGGGTGGGGGGAAAAGGCTC
 
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JMSF019A14+           ACCATTGAAAGTCAAAAAGGTACGGTTAAAGAGAAAACATTTGACGCCGGAATAAAACGA
JMFS077C02+           ACCATTGAAAGTCAAAAAGGTACGGTTAAAGAGAAAACATTTGACGCCGGAATAAAACGA
                      ____________________________________________________________
consensus             ACCATTGAAAGTCAAAAAGGTACGGTTAAAGAGAAAACATTTGACGCCGGAATAAAACGA
 
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JMSF019A14+           GTCTTGAAAAGTCTCCGTCAGGGGTTTTTATCAGTGCAGATCGAGCCAAGAAATAGAGGG
JMFS077C02+           GTCTTGAAAAGTCTCCGTCAGGGGTTTTTATCAGTGCAGATCGAGCCAAGAAATAGAGGG
                      ____________________________________________________________
consensus             GTCTTGAAAAGTCTCCGTCAGGGGTTTTTATCAGTGCAGATCGAGCCAAGAAATAGAGGG
 
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JMSF019A14+           AGACAAGCACACGGCAAGAGAAGAATAGTGGGCGTGTGGGTTTGAAAAAGAAGGGGCGGC
JMFS077C02+           AGACAAGCACACGGCAAGAGAAGAATAGTGGGCGTGTGGGTTTGAAAAAGAAGGGGCGGC
                      ____________________________________________________________
consensus             AGACAAGCACACGGCAAGAGAAGAATAGTGGGCGTGTGGGTTTGAAAAAGAAGGGGCGGC
 
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JMSF019A14+           CATTGAGGTGCAGAGAGGTATATAGAAATGGAAC                          
JMFS077C02+           CATTGAGGTGCAGAGAGGTATATAGAAATGGAACGAGGAGGTAAAGAAAGAAAAAGGGGA
                      ____________________________________________________________
consensus             CATTGAGGTGCAGAGAGGTATATAGAAATGGAACGAGGAGGTAAAGAAAGAAAAAGGGGA
 
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JMFS077C02+           AAATAAAATCAAAGAATCTGTAATAAAAAAGGAAAGAATTGAAGGTTGGTTGGGTTGGGT
                      ____________________________________________________________
consensus             AAATAAAATCAAAGAATCTGTAATAAAAAAGGAAAGAATTGAAGGTTGGTTGGGTTGGGT
 
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JMFS077C02+           TGGGTTCTTGGAACACATCCCATTTGCTGAGGAATAAAATAGGAGAGAAATTATTATGAG
                      ____________________________________________________________
consensus             TGGGTTCTTGGAACACATCCCATTTGCTGAGGAATAAAATAGGAGAGAAATTATTATGAG
 
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JMFS077C02+           ACTGGGCAGAGACGACAACGGCAACAACAACATCGTCCATTTCGGAAAAGTCATCAATTC
                      ____________________________________________________________
consensus             ACTGGGCAGAGACGACAACGGCAACAACAACATCGTCCATTTCGGAAAAGTCATCAATTC
 
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JMFS077C02+           TTTATTATTAAACTTTTCTGGGTGAGAGAGAGAAGAGGAAGAATGCGATGATGAGGAGCG
                      ____________________________________________________________
consensus             TTTATTATTAAACTTTTCTGGGTGAGAGAGAGAAGAGGAAGAATGCGATGATGAGGAGCG