Contig 001942:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+                                                              GCCTTTTCC
JMFS076C02+                                                        TCCCTAGCCTTTTCC
                      ____________________________________________________________
consensus                                                          TCCCTAGCCTTTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           TCTTTCTTCTTCTTCTTTTCGAGCTCTTCAGGAGTCAATTGTTTTCCCTCTGACGCTGCC
JMFS076C02+           TCTTCTTTCTTCTTCTTNTCGAGCTCTTCAGGAGTCAATTGTTTTCCCTCTGACGCTGCC
                      ____________________________________________________________
consensus             TCTTTTTTCTTCTTCTTTTCGAGCTCTTCAGGAGTCAATTGTTTTCCCTCTGACGCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           ACCACCCCATTTTTGCCATTGTTCTCCATTTCCTGAGATTTTGTCTCTACTCCAGCCATG
JMFS076C02+           ACCACCCCATTTTTGCCATTGTTCTCCATTTCCTGAGATTTTGTCTCTACTCCAGCCATG
                      ____________________________________________________________
consensus             ACCACCCCATTTTTGCCATTGTTCTCCATTTCCTGAGATTTTGTCTCTACTCCAGCCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           GTGGCTGCTTTAGTGGTCAATCGACGAGCAAATGAAAGATGCTTTGAGACTTGTCGCTCC
JMFS076C02+           GTGGCTGCTTTAGTGGTCAATCGACGAGCAAATGAAAGATGCTTTGAGACTTGTCGCTCC
                      ____________________________________________________________
consensus             GTGGCTGCTTTAGTGGTCAATCGACGAGCAAATGAAAGATGCTTTGAGACTTGTCGCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           GCAAGGTAGGGCGTGAAGCAAGAAGCCGGTAGCGGCAGTGATGGGCGGCGGATTATAGTG
JMFS076C02+           GCAAGGTAGGGCGTGAAGCAAGAAGCCGGTAGCGGCAGTGATGGGCGGCGGATTATAGTG
                      ____________________________________________________________
consensus             GCAAGGTAGGGCGTGAAGCAAGAAGCCGGTAGCGGCAGTGATGGGCGGCGGATTATAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           AATGAATGGTTTGCAAGACTCGCAATTTTTTTATTCTCATGGAAGGGGAAACACTGCAAA
JMFS076C02+           AATGAATGGTTTGCAAGACTCGCAATTTTTTTATTCTCATGGAAGGGGAAACACTGCAAA
                      ____________________________________________________________
consensus             AATGAATGGTTTGCAAGACTCGCAATTTTTTTATTCTCATGGAAGGGGAAACACTGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           ATTCACCGAACCGTTTTAAACACTCCACTGTGGACTGGTGGAGTCGTGGTGGCCTGGAGC
JMFS076C02+           ATTCACCGAACCGTTTTAAACACTCCACTGTGGACTGGTGGAGTCGTGGTGGCCTGGAGC
                      ____________________________________________________________
consensus             ATTCACCGAACCGTTTTAAACACTCCACTGTGGACTGGTGGAGTCGTGGTGGCCTGGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           AGAGTCGCCGATGACGGAGAAGATAGTGGACGGTGGCCTGGAGCAGGTCCTCGTGGACGG
JMFS076C02+           AGAGTCGCCGATGACGGAGAAGATAGTGGACGGTGGCCTGGAGCAGGTCCTCGTGGACGG
                      ____________________________________________________________
consensus             AGAGTCGCCGATGACGGAGAAGATAGTGGACGGTGGCCTGGAGCAGGTCCTCGTGGACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           TGGACGTCGTGGTGGCCAGCCGCCGATGGAGGACTGCTGGACTGAGCAACCGGGGGTGGG
JMFS076C02+           TGGACGTCGTGGTGGCCAGCCGCCGATGGAGGACTGCTGGACTGAGCAACCGGGGGTGGG
                      ____________________________________________________________
consensus             TGGACGTCGTGGTGGCCAGCCGCCGATGGAGGACTGCTGGACTGAGCAACCGGGGGTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           GTAGGGCGGTGTTGCAGTGAGCTGTGAGCCTGTGAGGCCTGACGGCCTGAGGAGTGAGGA
JMFS076C02+           GTAGGGCGGTGTTGCAGTGAGCTGTGAGCCTGTGAGGCCTGACGGCCTGAGGAGTGAGGA
                      ____________________________________________________________
consensus             GTAGGGCGGTGTTGCAGTGAGCTGTGAGCCTGTGAGGCCTGACGGCCTGAGGAGTGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093H09+           AGAAT                                                       
JMFS076C02+           AGAATGGGGTGGGAGATGGAGAATGAGAGTCGAGAGAGACAGAGGGGGGCTGAGTTTTAA
                      ____________________________________________________________
consensus             AGAATGGGGTGGGAGATGGAGAATGAGAGTCGAGAGAGACAGAGGGGGGCTGAGTTTTAA