Contig 001941:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS043H09Sequence601001941 (4)ref|XP_009593864.1|4e-19PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X2 [Nicotiana
JMFS072D10Sequence627001941 (4)ref|XP_009802559.1|5e-88PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Nicotiana
JMFS074G12Sequence670001941 (4)ref|XP_009802559.1|8e-52PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Nicotiana
JMFS166H05Sequence627001941 (4)ref|XP_009802559.1|5e-57PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X3 [Nicotiana

Alignment

This contig is upended


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JMFS072D10+                                              TCACATTCGGTACCCGAATATGATT
                      ____________________________________________________________
consensus                                                TCACATTCGGTACCCGAATATGATT
 
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JMFS072D10+           GCAGGTACCAGAGCTTTCAGCCACACTTTTCCTGGATATTTGTGATCCAGAGATAATCTC
                      ____________________________________________________________
consensus             GCAGGTACCAGAGCTTTCAGCCACACTTTTCCTGGATATTTGTGATCCAGAGATAATCTC
 
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JMFS072D10+           AGCATCAGTGCTCGGTGATCCAATGAAATTCAAACGAAGCACCTTTGGACGAGACTTTTT
                      ____________________________________________________________
consensus             AGCATCAGTGCTCGGTGATCCAATGAAATTCAAACGAAGCACCTTTGGACGAGACTTTTT
 
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JMFS072D10+           CATCATAACTACATTGCATTCCAGTTCCTGCATGCAACTTTTCGCCTCTTTTTTCATTCT
                      ____________________________________________________________
consensus             CATCATAACTACATTGCATTCCAGTTCCTGCATGCAACTTTTCGCCTCTTTTTTCATTCT
 
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JMFS072D10+           CTTGTCCAACACCACCCAATGAACTTGAGTTTTTTTGGCTTCAGCAGCTACTACCCCATA
JMFS166H05+                                         TTTTTTGGCTTCAGCAGCTACTACCCCATA
JMFS074G12+                                                             CTACCCCATA
                      ____________________________________________________________
consensus             CTTGTCCAACACCACCCAATGAACTTGAGTTTTTTTGGCTTCAGCAGCTACTACCCCATA
 
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JMFS072D10+           GTCTAATCCAGAAACGACTTTAATCTTCATTCTTATTTTATCTGGATCAAAAAGATTACT
JMFS166H05+           GTCTAATCCAGAAACGACTTTAATCTTCATTCTTATTTTATCTGGATCAAAAAGATTACT
JMFS074G12+           GTCTAATCCAGAAACGACTTTAATCTTCATTCTTATNTTATCTGGATCAAAAAGATTACT
                      ____________________________________________________________
consensus             GTCTAATCCAGAAACGACTTTAATCTTCATTCTTATTTTATCTGGATCAAAAAGATTACT
 
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JMFS072D10+           AAGTTGAAGCATTATTTGGGTGCATGAATCTGTAATGTAATCCTTCTGATCTAGACGTGT
JMFS166H05+           AAGTTGAAGCATTATTTGGGTGCATGAATCTGTAATGTAATCCTTCTGATCTAGACGTGT
JMFS074G12+           AAGTTGAAGCATTATTTGGGTGCATGAATCTGTAATGTAATCCTTCTGATCTAGACGTGT
                      ____________________________________________________________
consensus             AAGTTGAAGCATTATTTGGGTGCATGAATCTGTAATGTAATCCTTCTGATCTAGACGTGT
 
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JMFS072D10+           TCCAGAGAATGATTTCCAGTGAGCAGCCGTGCAATCACTCCCAAATCTTTGGAAACCCCA
JMFS166H05+           TCCAGAGAATGATTTCCAGTGAGCAGCCGTGCAATCACTCCCAAATCTTTGGAAACCCCA
JMFS074G12+           TCCAGAGAATGATTTCCAGTGAGCAGCCGTGCAATCACTCCCAAATCTTTGGAAACCCCA
                      ____________________________________________________________
consensus             TCCAGAGAATGATTTCCAGTGAGCAGCCGTGCAATCACTCCCAAATCTTTGGAAACCCCA
 
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JMFS072D10+           TAGTCTTTTACTTGAAGAACTATGATTTGGAATGACCACCAAAAGCTTCACACAATCTCC
JMFS166H05+           TAGTCTTTTACTTGAAGAACTATGATTTGGAATGACCACCAAAAGCTTCACACAATCTCC
JMFS043H09+                   TACTTGAAGAACTATGATTTGGAATGACCACCAAAAGCTTCACACAATCTCC
JMFS074G12+           TAGTCTTTTACTTGAAGAACTATGATTTGGAATGACCACCAAAAGCTTCACACAATCTCC
                      ____________________________________________________________
consensus             TAGTCTTTTACTTGAAGAACTATGATTTGGAATGACCACCAAAAGCTTCACACAATCTCC
 
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JMFS072D10+           AGGCTGAACAACATGAGTGAGAGCCCAAATCAGAGCAGCTCTTGGGATATCTTTGGAGAC
JMFS166H05+           AGGCTGAACAACATGAGTGAGAGCCCAAATCAGAGCAGCTCTTGGGATATCTTTGGAGAC
JMFS043H09+           AGGCTGAACAACATGAGTGAGAGCCCAAATCAGAGCAGCTCTTGGGATATCTTTGGAGAC
JMFS074G12+           AGGCTGAACAACATGAGTGAGAGCCCAAATCAGAGCAGCTCTTGGGATATCTTTGGAGAC
                      ____________________________________________________________
consensus             AGGCTGAACAACATGAGTGAGAGCCCAAATCAGAGCAGCTCTTGGGATATCTTTGGAGAC
 
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JMFS072D10+           TTTAACAGCAACAAGCACAAGCCTCTTTCCCGCATCCAAACTCCTATCTTTCCCACTCTT
JMFS166H05+           TTTAACAGCAACAAGCACAAGCCTCTTTCCCGCATCCAAACTCCTATCTTTCCCACTCTT
JMFS043H09+           TTTAACAGCAACAAGCACAAGCCTCTTTCCCGCATCCAAACTCCTATCTTTCCCACTCTT
JMFS074G12+           TTTAACAGCAACAAGCACAAGCCTCTTTCCCGCATCCAAACTCCTATCTTTCCCACTCTT
                      ____________________________________________________________
consensus             TTTAACAGCAACAAGCACAAGCCTCTTTCCCGCATCCAAACTCCTATCTTTCCCACTCTT
 
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JMFS072D10+           TT                                                          
JMFS166H05+           TTGTCTCATATTCATCTTAACTCTCAAGCCACCCAACAGACAATCTGCCACCTCTCAAAT
JMFS043H09+           TTGTCTCATATTCATCTTAACTCTCAAGCCACCCAACAGACAATCTGCCACCTCTCAAAT
JMFS074G12+           TTGTCTCATATTCATCTTAACTCTCAAGCCACCCAACAGACAATCTGCCACCTCTCAAAT
                      ____________________________________________________________
consensus             TTGTCTCATATTCATCTTAACTCTCAAGCCACCCAACAGACAATCTGCCACCTCTCAAAT
 
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JMFS166H05+           CAGCACTGTGAATTCATCAAACACCTTGTACCCATTTCGCCAAACTTCATTTTCTTTGCC
JMFS043H09+           CAGCACTGTGAATTCATCAAACACCTTGTACCCATTTCGCCAAACTTCATTTTCTTTGCC
JMFS074G12+           CAGCACTGTGAATTCATCAAACACCTTGTACCCATTTCGCCAAACTTCATTTTCTTTGCC
                      ____________________________________________________________
consensus             CAGCACTGTGAATTCATCAAACACCTTGTACCCATTTCGCCAAACTTCATTTTCTTTGCC
 
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JMFS166H05+           ACCCCATCAACAACAAAAGAAAAAGTCTTCACCTTTTGACCTCCTCGTTGAAGAAAAGCT
JMFS043H09+           ACCCCATCAACAACAAAAGAAAAAGTCTTCACCTTTTGACCTCCTCGTTGAAGAAAAGCT
JMFS074G12+           ACCCCATCAACAACAAAAGAAAAAGTCTTCACCTTTTGACCTCCTCGTTGAAGAAAAGCT
                      ____________________________________________________________
consensus             ACCCCATCAACAACAAAAGAAAAAGTCTTCACCTTTTGACCTCCTCGTTGAAGAAAAGCT
 
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JMFS166H05+           CAGAAATGTCCAAACAGCTACAATGGTTGAGAACTAACCATTGATTTCAAAGTAA     
JMFS043H09+           CAGAAATGTCCAAACAGCTACAATGGTTGAGAACTAACCATTGATTTCAAAGTAATTTCC
JMFS074G12+           CAGAAATGTCCAAACAGCTACAATGGTTGAGAACTAACCATTGATTTCAAAGTAATTTCC
                      ____________________________________________________________
consensus             CAGAAATGTCCAAACAGCTACAATGGTTGAGAACTAACCATTGATTTCAAAGTAATTTCC
 
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JMFS043H09+           ACTAAAGGCAGACTAAAAGT                                        
JMFS074G12+           ACTAAAGGCAGACTAAAAGTCTAAAACATTGCGATCAAGATTGGGATTTGCACAGTTCAT
                      ____________________________________________________________
consensus             ACTAAAGGCAGACTAAAAGTCTAAAACATTGCGATCAAGATTGGGATTTGCACAGTTCAT