Contig 001940:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS007F03+                                                GGTATATCAGTAGCAGGGTAATG
JMFS074F01+                                              GTGGTATATCAGTAGCAGGGTAATG
                      ____________________________________________________________
consensus                                                GTGGTATATCAGTAGCAGGGTAATG
 
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JMFS007F03+           CAAGCCAAGATAAGGTTCAAGATCAGGCTTGCGGCATTCTGCAACAACTTCCCCATGCTC
JMFS074F01+           CAAGCCAAGATAAGGTTCAAGATCAGGCTTGCGGCATTCTGCAACAACTTCCCCATGCTC
                      ____________________________________________________________
consensus             CAAGCCAAGATAAGGTTCAAGATCAGGCTTGCGGCATTCTGCAACAACTTCCCCATGCTC
 
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JMFS007F03+           ATCCTCATGGAATTTATAAACCATAACTCGGTCATAACCTGTCAAATCCCTTACTTCTCT
JMFS074F01+           ATCCTCATGGAATTTATAAACCATAACTCGGTCATAACCTGTCAAATCCCTTACTTCTCT
                      ____________________________________________________________
consensus             ATCCTCATGGAATTTATAAACCATAACTCGGTCATAACCTGTCAAATCCCTTACTTCTCT
 
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JMFS007F03+           AACTAACACATCACACAACAATGATATATCTCCACTTGGCAGTGATTGCAACTTCGAAAT
JMFS074F01+           AACTAACACATCACACAACAATGATATATCTCCACTTGGCAGTGATTGCAACTTCGAAAT
                      ____________________________________________________________
consensus             AACTAACACATCACACAACAATGATATATCTCCACTTGGCAGTGATTGCAACTTCGAAAT
 
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JMFS007F03+           GGCTTTAGCTGCTAGTTTATATGATTTCAATGCTCCAGCAGCTGTCACTGGAACATCTGC
JMFS074F01+           GGCTTTAGCTGCTAGTTTATATGATTTCAATGCTCCAGCAGCTGTCACTGGAACATCTGC
                      ____________________________________________________________
consensus             GGCTTTAGCTGCTAGTTTATATGATTTCAATGCTCCAGCAGCTGTCACTGGAACATCTGC
 
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JMFS007F03+           TGGATTGACAGGCTCCAAATCTATAACTAATCCAACATCAATTTGGTGTAAAATTGCATA
JMFS074F01+           TGGATTGACAGGCTCCAAATCTATAACTAATCCAACATCAATTCGGTGTAAAATTGCATA
                      ____________________________________________________________
consensus             TGGATTGACAGGCTCCAAATCTATAACTAATCCAACATCAATTTGGTGTAAAATTGCATA
 
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JMFS007F03+           AAAAGGCTTACCCGAATTTTTGCAGTGCACCAGAATAGGATTAATCAAACTAACTTCCTC
JMFS074F01+           AAAAGGCTTACCCGAATTTTTGCAGTGCACCAGAATAGGATTAATCAAACTAACTTCCTC
                      ____________________________________________________________
consensus             AAAAGGCTTACCCGAATTTTTGCAGTGCACCAGAATAGGATTAATCAAACTAACTTCCTC
 
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JMFS007F03+           AAAACTTGCTGCTTTTTCAAGTGCAGCAGCACCAGTTGACCGAAACAGTGTCCTAACATT
JMFS074F01+           AAAACTTGCTGCTTTTTCAAGTGCAGCAGCACCAGTTGACCGAAACAGTGTCCTAACATT
                      ____________________________________________________________
consensus             AAAACTTGCTGCTTTTTCAAGTGCAGCAGCACCAGTTGACCGAAACAGTGTCCTAACATT
 
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JMFS007F03+           GGTGCCAATAGTCAGAGCTTCCTGCTGTTCAATGCTTGGAACTGCATGTGGTGCCAAATC
JMFS074F01+           GGTGCCAATAGTCAGAGCTTCCTGCTGTTCAATGCTTGGAACTGCATGTGGTGCCAAATC
                      ____________________________________________________________
consensus             GGTGCCAATAGTCAGAGCTTCCTGCTGTTCAATGCTTGGAACTGCATGTGGTGCCAAATC
 
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JMFS007F03+           CAGCATTTCTGGTGCATTTTCA                                      
JMFS074F01+           CAGCATTTCTGGTGCATTTTCACTAAATCCAAGGACAGAAAAGTTCTGCTCATCAACGGC
                      ____________________________________________________________
consensus             CAGCATTTCTGGTGCATTTTCACTAAATCCAAGGACAGAAAAGTTCTGCTCATCAACGGC
 
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JMFS074F01+           TATCAAGCAGCCAAATGGTTGTATAAGACTTCCTCTTTGAATCTTCTGGAGATAAGCAGA
                      ____________________________________________________________
consensus             TATCAAGCAGCCAAATGGTTGTATAAGACTTCCTCTTTGAATCTTCTGGAGATAAGCAGA