Contig 001938:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS071B04+                                                                CAAAAGT
JMFS073D12+                                                         GCCTTCACAAAAGT
                      ____________________________________________________________
consensus                                                           GCCTTCACAAAAGT
 
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JMFS071B04+           CGGATGTTACAACCAACAATCAAGAATCTAAACCTCCTGTGGACTCAAATCTCGAGGAAG
JMFS073D12+           CGGATGTTACAACCAACAATCAAGAATCTAAACCTCCTGTGGACTCAAATCTCGAGGAAG
                      ____________________________________________________________
consensus             CGGATGTTACAACCAACAATCAAGAATCTAAACCTCCTGTGGACTCAAATCTCGAGGAAG
 
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JMFS071B04+           CTAAGGAAGTCATACAAGAGACTGGAGAGAAAGATCATGATGAAGCTAAGCATGAGGTTA
JMFS073D12+           CTAAGGAAGTCATACAAGAGACTGGAGAGAAAGATCATGATGAAGCTAAGCATGAGGTTA
                      ____________________________________________________________
consensus             CTAAGGAAGTCATACAAGAGACTGGAGAGAAAGATCATGATGAAGCTAAGCATGAGGTTA
 
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JMFS071B04+           AGGAGATACAGACAACAAAAGAGCAGCCAGCAGTTGCAGTTCAACCAGAGGATACGCAAG
JMFS073D12+           AGGAGATACAGACAACAAAAGAGCAGCCAGCAGTTGCAGTTCAACCAGAGGATACGCAAG
                      ____________________________________________________________
consensus             AGGAGATACAGACAACAAAAGAGCAGCCAGCAGTTGCAGTTCAACCAGAGGATACGCAAG
 
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JMFS071B04+           AGCAATTTAGCATGGAGCAGACAGTGAAGACCTCAAATTCTAATGGACAACAAACCAAAA
JMFS073D12+           AGCAATTTAGCATGGAGCAGACAGTGAAGACCTCAAATTCTAATGGACAACAAACCAAAA
                      ____________________________________________________________
consensus             AGCAATTTAGCATGGAGCAGACAGTGAAGACCTCAAATTCTAATGGACAACAAACCAAAA
 
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JMFS071B04+           CAATAGTCACTGGTTCACATAAAAAACTTGGAATGTCCAAAGAACAATCCCCTCCTCTGC
JMFS073D12+           CAATAGTCACTGGTTCACATAAAAAACTTGGAATGTCCAAAGAACAATCCCCTCCTCTGC
                      ____________________________________________________________
consensus             CAATAGTCACTGGTTCACATAAAAAACTTGGAATGTCCAAAGAACAATCCCCTCCTCTGC
 
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JMFS071B04+           ACAAAGATATCAAAGATAGCAGTATCTCAAAGTTAGTTCAACAGACAGATATTGGAGGTA
JMFS073D12+           ACAAAGATATCAAAGATAGCAGTATCTCAAAGTTAGTTCAACAGACAGATATTGGAGGTA
                      ____________________________________________________________
consensus             ACAAAGATATCAAAGATAGCAGTATCTCAAAGTTAGTTCAACAGACAGATATTGGAGGTA
 
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JMFS071B04+           ATAAGCAATCCATGGAAGAGAGGCCGGTTAATGTGATAACCCTTGCAGGTGATAACAGAG
JMFS073D12+           ATAAGCAATCCATGGAAGAGAGGCCGGTTAATGTGATAACCCTTGCAGGTGATAACAGAG
                      ____________________________________________________________
consensus             ATAAGCAATCCATGGAAGAGAGGCCGGTTAATGTGATAACCCTTGCAGGTGATAACAGAG
 
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JMFS071B04+           GGGCATCTTTGCAATTTGGCTTCGGCTCACCTAAGAATGAGAAGCCAATCCACATCCACA
JMFS073D12+           GGGCATCTTTGCAATTTGGCTTCGGCTCACCTAAGAATGAGAAGCCAATCCACATCCACA
                      ____________________________________________________________
consensus             GGGCATCTTTGCAATTTGGCTTCGGCTCACCTAAGAATGAGAAGCCAATCCACATCCACA
 
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JMFS071B04+           GAAGCTATAAATCAAATCCTGATGAAAGTATTGAGGCAACCACCGATGCAGAGGGAAGTT
JMFS073D12+           GAAGCTATAAATCAAATCCTGATGAAAGTATTGAGGCAACCACCGATGCAGAGGGAAGTT
                      ____________________________________________________________
consensus             GAAGCTATAAATCAAATCCTGATGAAAGTATTGAGGCAACCACCGATGCAGAGGGAAGTT
 
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JMFS071B04+           CCGGGGGAAGAAAATTAGAAGACCAAAAAGCCATCAAAAATCAGGAAGTGAAAGCATGTG
JMFS073D12+           CCGGGGGAAGAAAATTAGAAGACCAAAAAGCCATCAAAAATCAGGAAGTGAAAGCATGTG
                      ____________________________________________________________
consensus             CCGGGGGAAGAAAATTAGAAGACCAAAAAGCCATCAAAAATCAGGAAGTGAAAGCATGTG