Contig 001934:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS050B07+                                                            AATGCAGGGTC
JMFS071A01+                                                        CCTTAATGCAGGGTC
                      ____________________________________________________________
consensus                                                          CCTTAATGCAGGGTC
 
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JMFS050B07+           AATGGAGTCAGGTCTG-TTGTAGCTCCAATAACTAAAACATGGCTGGATTTGCCATCATA
JMFS071A01+           AATGGAGTCAGGTCTGTTTGTAGCTCCAATAACTAAAACATGGCTGGATTTGCCATCATA
                      ____________________________________________________________
consensus             AATGGAGTCAGGTCTGTTTGTAGCTCCAATAACTAAAACATGGCTGGATTTGCCATCATA
 
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JMFS050B07+           TCCTTCTTGCATTGCATTTCCATGTCCACCATCAACACGTTCTGAAGCAGAATTCCCATC
JMFS071A01+           TCCTTCTTGCATTGCATTTCCATGTCCACCATCAACACGTTCTGAAGCAGAATTCCCATC
                      ____________________________________________________________
consensus             TCCTTCTTGCATTGCATTTCCATGTCCACCATCAACACGTTCTGAAGCAGAATTCCCATC
 
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JMFS050B07+           TGCATGTTGCACATTTCTATGTGATTCATCCATGCATGTCATCAATTGTGTTACAATTCG
JMFS071A01+           TGCATGTTGCACATTTCTATGTGATTCATCCATGCATGTCATCAATTGTGTTACAATTCG
                      ____________________________________________________________
consensus             TGCATGTTGCACATTTCTATGTGATTCATCCATGCATGTCATCAATTGTGTTACAATTCG
 
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JMFS050B07+           CCGTTCCATTTCTCGCTGCACATTTTCTCTTTTTGAAGCAATGGCATCAATCTCATCAAT
JMFS071A01+           CCGTTCCATTTCTCGCTGCACATTTTCTCTTTTTGAAGCAATGGCATCAATCTCATCAAT
                      ____________________________________________________________
consensus             CCGTTCCATTTCTCGCTGCACATTTTCTCTTTTTGAAGCAATGGCATCAATCTCATCAAT
 
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JMFS050B07+           AAATACAATAGATGGTGCTGTCCGGTTAGCTTTTGAGAATAATTCACGTATATTCTCTTC
JMFS071A01+           AAATACAATAGATGGTGCTGTCCGGTTAGCTTTTGAGAATAATTCACGTATATTCTCTTC
                      ____________________________________________________________
consensus             AAATACAATAGATGGTGCTGTCCGGTTAGCTTTTGAGAATAATTCACGTATATTCTCTTC
 
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JMFS050B07+           TGATGCACCTGAAATCCCGGAGACCAGTTCAGTAGCAGAAATCTTGTAAAAGGGAACTCC
JMFS071A01+           TGATGCACCTGAAATCCCGGAGACCAGTTCAGTAGCAGAAATCTTGTAAAAGGGAACTCC
                      ____________________________________________________________
consensus             TGATGCACCTGAAATCCCGGAGACCAGTTCAGTAGCAGAAATCTTGTAAAAGGGAACTCC
 
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JMFS050B07+           AGTTTCATTAGCAATAGCGTGAGCTAGCTTTGTCTTCCCACACCCCGGTGGCCCATAAAA
JMFS071A01+           AGTTTCATTAGCAATAGCGTGAGCTAGCTTTGTCTTCCCACACCCCGGTGGCCCATAAAA
                      ____________________________________________________________
consensus             AGTTTCATTAGCAATAGCGTGAGCTAGCTTTGTCTTCCCACACCCCGGTGGCCCATAAAA
 
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JMFS050B07+           GAGGATCCCTGACATTGGCCTAATTCCTAGATGTTTCAGGAATTGAAGATGGAGGTCATG
JMFS071A01+           GAGGATCCCTGACATTGGCCTAATTCCTAGATGTTTCAGGAATTGAAGATGGAGGTCATG
                      ____________________________________________________________
consensus             GAGGATCCCTGACATTGGCCTAATTCCTAGATGTTTCAGGAATTGAAGATGGAGGTCATG
 
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JMFS050B07+           GTTCCATTATACCATCTTCAATTCCTCTACCACAGAACCCATTCCTCCTAGGTCCTTAAA
JMFS071A01+           GTTCCATTATACCATCTTCAATTCCTCTACCACAGAACCCATTCCTCCTAGGTCCTTAAA
                      ____________________________________________________________
consensus             GTTCCATTATACCATCTTCAATTCCTCTACCACAGAACCCATTCCTCCTAGGTCCTTAAA
 
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JMFS050B07+           TTTCGGCCCAGCATTTGGCTTGTCAGCATTGCTTTCAATCCCTATTCCTCCTAGTTCTGG
JMFS071A01+           TTTCGGCCCAGCATTTGGCTTGTCAGCATTGCTTTCAATCCCTATTCCTCCTAGTTCTGG
                      ____________________________________________________________
consensus             TTTCGGCCCAGCATTTGGCTTGTCAGCATTGCTTTCAATCCCTATTCCTCCTAGTTCTGG