Contig 001931:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+                     CGCCGGGATTTCCCCTACGAGACTGCAATTGGATAAGTAGAGCCAATTCA
JMFS069D10+                                                   GGATAAGTAGAGCCAATTCA
                      ____________________________________________________________
consensus                       CGCCGGGATTTCCCCTACGAGACTGCAATTGGATAAGTAGAGCCAATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           AGCGTGTAAGCTTCACAATCCCCTCCGGCACCGGAGATTCGTCAAACGAATTATCGCCGA
JMFS069D10+           AGCGTGTAAGCTTCACAATCCCCTCCGGCACCGGAGATTCGTCAAACGAATTATCGCCGA
                      ____________________________________________________________
consensus             AGCGTGTAAGCTTCACAATCCCCTCCGGCACCGGAGATTCGTCAAACGAATTATCGCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           GACTAAGAACTTCTAGGTTAATCATATTGACAATAGAATCCCACGGGATTCTCCCGGAGA
JMFS069D10+           GACTAAGAACTTCTAGGTTAATCATATTGACAATAGAATCCCACGGGATTCTCCCGGAGA
                      ____________________________________________________________
consensus             GACTAAGAACTTCTAGGTTAATCATATTGACAATAGAATCCCACGGGATTCTCCCGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           ATCCACTGCGATTCATGTACAAATGCGAAATCCGATTGAGAGATGGAATCTCCGGGATTG
JMFS069D10+           ATCCACTGCGATTCATGTACAAATGCGAAATCCGATTGAGAGATGGAATCTCCGGGATTG
                      ____________________________________________________________
consensus             ATCCACTGCGATTCATGTACAAATGCGAAATCCGATTGAGAGATGGAATCTCCGGGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           ATCCGGTGAAGAAATTATTCCCGAGGTCCAAGTATTTCAGCCCAACGCACTTATCCAACT
JMFS069D10+           ATCCGGTGAAGAAATTATTCCCGAGGTCCAAGTATTTCAGCCCAACGCACTTATCCAACT
                      ____________________________________________________________
consensus             ATCCGGTGAAGAAATTATTCCCGAGGTCCAAGTATTTCAGCCCAACGCACTTATCCAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           CCCCCGCGACTTTTCCGGAAAGTTTGTTAAACCCGAGCGAGATTTTCTCCAACGACTCCA
JMFS069D10+           CCCCCGCGACTTTTCCGGAAAGTTTGTTAAACCCGAGCGAGATTTTCTCCAACGACTCCA
                      ____________________________________________________________
consensus             CCCCCGCGACTTTTCCGGAAAGTTTGTTAAACCCGAGCGAGATTTTCTCCAACGACTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           AAGAGCAAATCAAATCAAAAGGAACAGAGCCGGCGAGGCTCCGCCGAGAAAGCTCGATTT
JMFS069D10+           AAGAGCAAATCAAATCAAAAGGAACAGAGCCGGCGAGGCTCCGCCGAGAAAGCTCGATTT
                      ____________________________________________________________
consensus             AAGAGCAAATCAAATCAAAAGGAACAGAGCCGGCGAGGCTCCGCCGAGAAAGCTCGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           CCGCTACGGCGCCATTAGAGGCGCAGGTGATTCCGGCGAAGGTGCAGAGCGGGGTATCGG
JMFS069D10+           CCGCTACGGCGCCATTAGAGGCGCAGGTGATTCCGGCGAAGGTGCAGAGCGGGGTATCGG
                      ____________________________________________________________
consensus             CCGCTACGGCGCCATTAGAGGCGCAGGTGATTCCGGCGAAGGTGCAGAGCGGGGTATCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           CGTTCCAGGTGTCGAACACGTCGGTGGCGGAGCTCTGGAAGGCGGACTTGATGGACAGGA
JMFS069D10+           CGTTCCAGGTGTCGAACACGTCGGTGGCGGAGCTCTGGAAGGCGGACTTGATGGACAGGA
                      ____________________________________________________________
consensus             CGTTCCAGGTGTCGAACACGTCGGTGGCGGAGCTCTGGAAGGCGGACTTGATGGACAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           GAGTCTGAAGCTCGTCGGAGGTGGCGACGGAGAAGAGAAAGAAGAAGAAGAGGGCGGTGA
JMFS069D10+           GAGTCTGAAGCTCGTCGGAGGTGGCGACGGAGAAGAGAAAGAAGAAGAAGAGGGCGGTGA
                      ____________________________________________________________
consensus             GAGTCTGAAGCTCGTCGGAGGTGGCGACGGAGAAGAGAAAGAAGAAGAAGAGGGCGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS066C03+           AGTTTGGCCGGAAAATGACGGCGGCCGCCATTGTGA                        
JMFS069D10+           AGTTTGGCCGGAAAATGACGGCGGCCGCCATTGTGAGACAGTGGAAAGACGTGAGTGAGA
                      ____________________________________________________________
consensus             AGTTTGGCCGGAAAATGACGGCGGCCGCCATTGTGAGACAGTGGAAAGACGTGAGTGAGA