Contig 001930:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS069C09Sequence627001930 (3)ref|XP_009764557.1|2e-88PREDICTED: uncharacterized protein LOC104216239 isoform X2 [Nicotiana sylvestri
JMFS070B08Sequence629001930 (3)ref|XP_009595116.1|7e-88PREDICTED: uncharacterized protein LOC104091476 isoform X2 [Nicotiana tomentosi
JMFS105C09Sequence618001930 (3)ref|XP_009595116.1|1e-121PREDICTED: uncharacterized protein LOC104091476 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS070B08+                                     CGCTCAGCATACTNTGAACCTTCCATCATCAGGA
JMFS105C09+                                                   TGAACCTTCCATCATCAGGA
JMFS069C09+                                       CTCAGCATACTTTGAACCTTCCATCATCAGGA
                      ____________________________________________________________
consensus                                       CGCTCAGCATACTTTGAACCTTCCATCATCAGGA
 
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JMFS070B08+           CCCAGTGTGCATCCTGCATCCGTCCATTAGCATTCCTACTTCCTCTATACTCTTCCATTA
JMFS105C09+           CCCAGTGTGCATCCTGCATCCGTCCATTAGCATTCCTACTTCCTCTATACTCTTCCATTA
JMFS069C09+           CCCAGTGTGCATCCTGCATCCGTCCATTAGCATTCCTACTTCCTCTATACTCTTCCATTA
                      ____________________________________________________________
consensus             CCCAGTGTGCATCCTGCATCCGTCCATTAGCATTCCTACTTCCTCTATACTCTTCCATTA
 
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JMFS070B08+           CAGCCCCTCTTTCCTTTTCCAAGTCATGTTCTGACGCTCGGACCTCTGAGCTGAATTCTG
JMFS105C09+           CAGCCCCTCTTTCCTTTTCCAAGTCATGTTCTGACGCTCGGACCTCTGAGCTGAATTCTG
JMFS069C09+           CAGCCCCTCTTTCCTTTTCCAAGTCATGTTCTGACGCTCGGACCTCTGAGCTGAATTCTG
                      ____________________________________________________________
consensus             CAGCCCCTCTTTCCTTTTCCAAGTCATGTTCTGACGCTCGGACCTCTGAGCTGAATTCTG
 
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JMFS070B08+           CCAAGATGGAAATTGCCTGAGACAATAATTCGGGCTTGTCAATAGGAACAAAGAGCTCAT
JMFS105C09+           CCAAGATGGAAATTGCCTGAGACAATAATTCGGGCTTGTCAATAGGAACAAAGAGCTCAT
JMFS069C09+           CCAAGATGGAAATTGCCTGAGACAATAATTCGGGCTTGTCAATAGGAACAAAGAGCTCAT
                      ____________________________________________________________
consensus             CCAAGATGGAAATTGCCTGAGACAATAATTCGGGCTTGTCAATAGGAACAAAGAGCTCAT
 
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JMFS070B08+           AAACAGTTTCATCAGCAGATGTGACTGCATTCTGGCAGGCACCAAATTCTGCCCCGATAC
JMFS105C09+           AAACAGTTTCATCAGCAGATGTGACTGCATTCTGGCAGGCACCAAATTCTGCCCCGATAC
JMFS069C09+           AAACAGTTTCATCAGCAGATGTGACTGCATTCTGGCAGGCACCAAATTCTGCCCCGATAC
                      ____________________________________________________________
consensus             AAACAGTTTCATCAGCAGATGTGACTGCATTCTGGCAGGCACCAAATTCTGCCCCGATAC
 
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JMFS070B08+           TTTCAAGAAACTTAACAATATCATGATTTGTGTATTTCTCAGTGGCACTAAAAGCAAGAT
JMFS105C09+           TTTCAAGAAACTTAACAATATCATGATTTGTGTATTTCTCAGTGGCACTAAAAGCAAGAT
JMFS069C09+           TTTCAAGAAACTTAACAATATCATGATTTGTGTATTTCTCAGTGGCACTAAAAGCAAGAT
                      ____________________________________________________________
consensus             TTTCAAGAAACTTAACAATATCATGATTTGTGTATTTCTCAGTGGCACTAAAAGCAAGAT
 
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JMFS070B08+           GTTCTACTATATGAGCAACCCCACGCTCTTCCTCCTCTTCTAGAA-----CCAGCTCGGA
JMFS105C09+           GTTCTACTATATGAGCAACCCCACGCTCTTCCTCCTCTTCTAGAACTGAGCCAGCTCGGA
JMFS069C09+           GTTCTACTATATGAGCAACCCCACGCTCTTCCTCCTCTTCTAGAA-----CCAGCTCGGA
                      ____________________________________________________________
consensus             GTTCTACTATATGAGCAACCCCACGCTCTTCCTCCTCTTCTAGAA-----CCAGCTCGGA
 
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JMFS070B08+           CGGCGAGTGCGAGAGCAGCTCTCATTTTGGGCTTGGAATTGGATCGAACATAGTAAGTGA
JMFS105C09+           CGGCGAGTGCGAGAGCAGCTCTCATTTTGGGCTTGGAATTGGATCGAACATAGTAAGTGA
JMFS069C09+           CGGCGAGTGCGAGAGCAGCTCTCATTTTGGGCTTGGAATTGGATCGAACATAGTAAGTGA
                      ____________________________________________________________
consensus             CGGCGAGTGCGAGAGCAGCTCTCATTTTGGGCTTGGAATTGGATCGAACATAGTAAGTGA
 
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JMFS070B08+           GACCATTGTCGAGGCGGCCGTAGTCGACTCCGTACGGCGTCTGCGACAAGGCCTCCTCCA
JMFS105C09+           GACCATTGTCGAGGCGGCCGTAGTCGACTCCGTACGGCGTCTGCGACAAGGCCTCCTCCA
JMFS069C09+           GACCATTGTCGAGGCGGCCGTAGTCGACTCCGTACGGCGTCTGCGACAAGGCCTCCTCCA
                      ____________________________________________________________
consensus             GACCATTGTCGAGGCGGCCGTAGTCGACTCCGTACGGCGTCTGCGACAAGGCCTCCTCCA
 
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JMFS070B08+           TGTTCACATTCACCAGTTTCAATGAACGGAACCGGTGTTTCTTCGGCAGCATCTGCGATG
JMFS105C09+           TGTTCACATTCACCAGTTTCAATGAACGGAACCGGTGTTTCTTCGGCAGCATCTGCGATG
JMFS069C09+           TGTTCACATTCACCAGTTTCAATGAACGGAACCGGTGTTTCTTCGGCAGCATCTGCGATG
                      ____________________________________________________________
consensus             TGTTCACATTCACCAGTTTCAATGAACGGAACCGGTGTTTCTTCGGCAGCATCTGCGATG
 
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JMFS070B08+           ATTCCGCCGGTAACAAATCCATCCTCGCCTCCTCTATTCTCGTCTTTCACCAAGTCA   
JMFS105C09+           ATTCCGCCGGTAACAAATCCATCCTCGCCTCCTCTATTCTCGTCTTTCACCAAGTCA   
JMFS069C09+           ATTCCGCCGGTAACAAATCCATCCTCGCCTCCTCTATTCTCGTCTTTCACCAAGTCACAA
                      ____________________________________________________________
consensus             ATTCCGCCGGTAACAAATCCATCCTCGCCTCCTCTATTCTCGTCTTTCACCAAGTCACAA