Contig 001929:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS101B12+                                                  AGGTTCCACTCTTTCCTGCCA
                      ____________________________________________________________
consensus                                                    AGGTTCCACTCTTTCCTGCCA
 
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JMFS101B12+           TCTGGAGAAAGATTCTACTTTAAAGTTCTCATCTACTAGCTGTGTATCATCTTTCAGATT
JMFS066E06+                                                      GTATCATCTTTCAGATT
                      ____________________________________________________________
consensus             TCTGGAGAAAGATTCTACTTTAAAGTTCTCATCTACTAGCTGTGTATCATCTTTCAGATT
 
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JMFS101B12+           GTTGAATTGAAATAAGCCTTCAGATTCACTGCCTTTCTCCAATGCATCAACAGAAGGCTT
JMFS066E06+           GTTGAATTGAAATAAGCCTTCAGATTCACTGCCTTTCTCCAATGCATCAACAGAAGGCTT
                      ____________________________________________________________
consensus             GTTGAATTGAAATAAGCCTTCAGATTCACTGCCTTTCTCCAATGCATCAACAGAAGGCTT
 
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JMFS101B12+           CCTTGATGGAACAAAGCTTTTGGTTCTGCGTTTAGCTTTAGCACCTGAAGAAGTAGAATC
JMFS066E06+           CCTTGATGGAACAAAGCTTTTGGTTCTGCGTTTAGCTTTAGCACCTGAAGAAGTAGAATC
                      ____________________________________________________________
consensus             CCTTGATGGAACAAAGCTTTTGGTTCTGCGTTTAGCTTTAGCACCTGAAGAAGTAGAATC
 
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JMFS101B12+           CAGAACTTGAGGAGTCCGCAGTTGTGTGAGGTTAATTTCTCTTGCATCAGTCCTCTCCAC
JMFS066E06+           CAGAACTTGAGGAGTCCGCAGTTGTGTGAGGTTAATTTCTCTTGCATCAGTCCTCTCCAC
                      ____________________________________________________________
consensus             CAGAACTTGAGGAGTCCGCAGTTGTGTGAGGTTAATTTCTCTTGCATCAGTCCTCTCCAC
 
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JMFS101B12+           AATTTTGCTCCTCAAATGGTTTATGTGATTATCCATTTTTGTTATAATATTTGCAGTGTG
JMFS066E06+           AATTTTGCTCCTCAAATGGTTTATGTGATTATCCATTTTTGTTATAATATTTGCAGTGTG
                      ____________________________________________________________
consensus             AATTTTGCTCCTCAAATGGTTTATGTGATTATCCATTTTTGTTATAATATTTGCAGTGTG
 
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JMFS101B12+           CTCAACAATATTAGAGCTCTTGCTAGTTGTAATTTCCCGGTTGCAACTTTTTGAGGTGAT
JMFS066E06+           CTCAACAATATTAGAGCTCTTGCTAGTTGTAATTTCCCGGTTGCAACTTTTTGAGGTGAT
                      ____________________________________________________________
consensus             CTCAACAATATTAGAGCTCTTGCTAGTTGTAATTTCCCGGTTGCAACTTTTTGAGGTGAT
 
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JMFS101B12+           CTCTCCTTCACTTTTCACTTGACTTTCTGATTCAACAGCCAGAAGCCATGCTCTTGTTTC
JMFS066E06+           CTCTCCTTCACTTTTCACTTGACTTTCTGATTCAACAGCCAGAAGCCATGCTCTTGTTTC
                      ____________________________________________________________
consensus             CTCTCCTTCACTTTTCACTTGACTTTCTGATTCAACAGCCAGAAGCCATGCTCTTGTTTC
 
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JMFS101B12+           AATCTCTCTTAGGAGGTTCAATGGATAAACTGGGTTAGATTGAGTTATCATTCCACTCAG
JMFS066E06+           AATCTCTCTTAGGAGGTTCAATGGATAAACTGGGTTAGATTGAGTTATCATTCCACTCAG
                      ____________________________________________________________
consensus             AATCTCTCTTAGGAGGTTCAATGGATAAACTGGGTTAGATTGAGTTATCATTCCACTCAG
 
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JMFS101B12+           CCATTGCAAAGAAAGCAATAACAGTTCATGAAGCTCTCTGGTTGGGAGATCTTTCTCTGC
JMFS066E06+           CCATTGCAAAGAAAGCAATAACAGTTCATGAAGCTCTCTGGTTGGGAGATCTTTCTCTGC
                      ____________________________________________________________
consensus             CCATTGCAAAGAAAGCAATAACAGTTCATGAAGCTCTCTGGTTGGGAGATCTTTCTCTGC
 
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JMFS101B12+           TTCCTCAGCATGCTTAAGAAAGAATAGTCCT                             
JMFS066E06+           TTCCTCAGCATGCTTAAGAAAGAATAGTCCTGCCTGTAAAGGTGGAAAAGAATTTCTAAT
                      ____________________________________________________________
consensus             TTCCTCAGCATGCTTAAGAAAGAATAGTCCTGCCTGTAAAGGTGGAAAAGAATTTCTAAT
 
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JMFS066E06+           AAATAGTGTCTGGCAGTGGCCCCACAAAGCAACTCTTTCTTCTTGGACGTCCCAAAGAAA
                      ____________________________________________________________
consensus             AAATAGTGTCTGGCAGTGGCCCCACAAAGCAACTCTTTCTTCTTGGACGTCCCAAAGAAA