Contig 001928:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS123H12+                                            AAACTTCCTCTTGAAGCCTCTTCTTCT
                      ____________________________________________________________
consensus                                              AAACTTCCTCTTGAAGCCTCTTCTTCT
 
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JMFS123H12+           CAGCTTGCAAGGTATTTACGGTAATATTAAGCATATCGATCTCCACTGCCTTAATCTTAA
                      ____________________________________________________________
consensus             CAGCTTGCAAGGTATTTACGGTAATATTAAGCATATCGATCTCCACTGCCTTAATCTTAA
 
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JMFS123H12+           GTTGCTTTTGTAGCTCAACAATATCTGATTCTTGCTCTTTCAGCCCATAATACTCCAACA
                      ____________________________________________________________
consensus             GTTGCTTTTGTAGCTCAACAATATCTGATTCTTGCTCTTTCAGCCCATAATACTCCAACA
 
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JMFS123H12+           GCTCCCCTTCGAGCTTCACTTCCCTCTCCTCGAGCTCTTTCACAAGATTTCTTAATCTTT
JMFS009C03+                                                 TTCACAAGATTTCTTAATCTTT
JMFS062E10+                                                           TTCTTAATCTTT
                      ____________________________________________________________
consensus             GCTCCCCTTCGAGCTTCACTTCCCTCTCCTCGAGCTCTTTCACAAGATTTCTTAATCTTT
 
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JMFS123H12+           CCAGCTCACTTGCATTATTAGCCATCTCATTTTCATATGCTCTCTCCTTCTCTGCATCAT
JMFS009C03+           CCAGCTCACTTGCATTATTAGCAATGTCATTTTCATATGCTCTCTCCTTCTCTGCATCAT
JMFS062E10+           CCAGCTCACTTGCATTATTAGCCATCTCATTTTCATATGCTCTCTCCTTCTCTGCATCAT
                      ____________________________________________________________
consensus             CCAGCTCACTTGCATTATTAGCCATCTCATTTTCATATGCTCTCTCCTTCTCTGCATCAT
 
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JMFS123H12+           ACATACCACTGGGCAACGGAAACTCTATCTCGCCTGATAAAAGATGTTCAAATTCAGGAA
JMFS009C03+           ACATACCACTGGGCAACGGAAACTCTATCTCGCCTGATAAAAGATGTTCAAATTCAGGAA
JMFS062E10+           ACATACCACTGGGCAACGGAAACTCTATCTCGCCTGATAAAAGATGTTCAAATTCAGGAA
                      ____________________________________________________________
consensus             ACATACCACTGGGCAACGGAAACTCTATCTCGCCTGATAAAAGATGTTCAAATTCAGGAA
 
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JMFS123H12+           AGAGGTCATCTTCCATATCCAACGATTTCCTCAACGTGGGATTTATAATCCCATTTATTA
JMFS009C03+           AGAGGTCATCTTCCATATCCAACGATTTCCTCAACGTGGGATTTATAATCCCATTTATTA
JMFS062E10+           AGAGGTCATCTTCCATATCCAACGATTTCCTCAACGTGGGATTTATAATCCCATTTATTA
                      ____________________________________________________________
consensus             AGAGGTCATCTTCCATATCCAACGATTTCCTCAACGTGGGATTTATAATCCCATTTATTA
 
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JMFS123H12+           ATTTAACTTCTTCTTTCTCCTCTTCCACCTCACCCTCTTTGAGGCCATTCTTAGAATAGG
JMFS009C03+           ATTTAACTTCTTCTTTATCCTCTTCCACCTCACCCTCTTTGAGGCCATTCTTAGAATAGG
JMFS062E10+           ATTTAACTTCTTCTTTCTCCTCTTCCACCTCACCCTCTTTGAGGCCATTCTTAGAATAGG
                      ____________________________________________________________
consensus             ATTTAACTTCTTCTTTCTCCTCTTCCACCTCACCCTCTTTGAGGCCATTCTTAGAATAGG
 
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JMFS123H12+           TAATCTGCTCTTTGTCTTCCTCTTCATTCCTAGTATGTTCTTCAGTATTTCCTGAAGGCT
JMFS009C03+           TAATCTGCTCTTTGTCTTCCTCTTCATTCCTAGTATGTTCTTCAGTATTTCCTGAAGGCT
JMFS062E10+           TAATCTGCTCTTTGTCTTCCTCTTCATTCCTAGTATGTTCTTCAGTATTTCCTGAAGGCT
                      ____________________________________________________________
consensus             TAATCTGCTCTTTGTCTTCCTCTTCATTCCTAGTATGTTCTTCAGTATTTCCTGAAGGCT
 
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JMFS123H12+           TGGGTGGCCTTTGGGGTTTGACACTAAGCTGCCTAACTCCATAGGCTGCAATTGAAGCAG
JMFS009C03+           TGGGTGGCCTTTGGGGTTTGACACTAAGCTGCCTAACTCCATAGGCTGCAATTGAAGCAG
JMFS062E10+           TGGGTGGCCTTTGGGGTTTGACACTAAGCTGCCTAACTCCATAGGCTGCAATTGAAGCAG
                      ____________________________________________________________
consensus             TGGGTGGCCTTTGGGGTTTGACACTAAGCTGCCTAACTCCATAGGCTGCAATTGAAGCAG
 
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JMFS123H12+           CAA                                                         
JMFS009C03+           CAACCAAGAAACCTACTCTCACAATCATGTGGATACAAAGAATTGAACTTTCCACTCATC
JMFS062E10+           CAACCAAGAAACCTACTCTCACAATCATGTGGATACAAAGAATTGAACTTTCCACTCATC
                      ____________________________________________________________
consensus             CAACCAAGAAACCTACTCTCACAATCATGTGGATACAAAGAATTGAACTTTCCACTCATC
 
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JMFS009C03+           TACTGGGATGGGATAACCCAATCCTCATACACCTCTCCACCCATAGCACCAAAGACCCAT
JMFS062E10+           TACTGGGATGGGATAACCCAATCCTCATACACCTCTCCACCCATAGCACCAAAGACCCAT
                      ____________________________________________________________
consensus             TACTGGGATGGGATAACCCAATCCTCATACACCTCTCCACCCATAGCACCAAAGACCCAT
 
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JMFS009C03+           TTTTCACACCCAAACCATCACTCCAACATAAAATGATGAAAATAAATAACACCCAGATTC
JMFS062E10+           TTTTCACACCCAAACCATCACTCCAACATAAAATGATGAAAATAAATAACACCCAGATTC
                      ____________________________________________________________
consensus             TTTTCACACCCAAACCATCACTCCAACATAAAATGATGAAAATAAATAACACCCAGATTC
 
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JMFS009C03+           TTGAATTGCCTATAGACTCCTATTATGCCACTCTAAGCTGAACATTT             
JMFS062E10+           TTGAATTGCCTATAGACTCCTATTATGCCACTCTAAGCTGAACATTTGAAGAAAATGAGG
                      ____________________________________________________________
consensus             TTGAATTGCCTATAGACTCCTATTATGCCACTCTAAGCTGAACATTTGAAGAAAATGAGG