Contig 001925:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038C14Sequence493001925 (2)ref|XP_011075582.1|2e-90PREDICTED: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplasti658022378gb|ABK97438.1|8e-71putative starch phosphorylase, partial [Sorghum bicolor] gb|ABK97439.1| putative
JMFS055G08Sequence613001925 (2)ref|XP_009600215.1|5e-73PREDICTED: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplasti

Alignment

This contig is upended


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JMFF038C14+                  GTAAATCAAAAGCTTCTGCAGCAACTTTNGTTGACCATAAACGAAGGTTAAGA
                      ____________________________________________________________
consensus                    GTAAATCAAAAGCTTCTGCAGCAACTTTNGTTGACCATAAACGAAGGTTAAGA
 
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JMFF038C14+           GTGGTTTTGGTTTTGTATCCCGGGATCGGGACATCATAGGCAACCGCTATTACATCTTCT
                      ____________________________________________________________
consensus             GTGGTTTTGGTTTTGTATCCCGGGATCGGGACATCATAGGCAACCGCTATTACATCTTCT
 
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JMFF038C14+           CCTCCAACCCATTCCTTCCTTCCATCAGCACCTTCAATCACTTCCCCGTAGAATTTCACA
                      ____________________________________________________________
consensus             CCTCCAACCCATTCCTTCCTTCCATCAGCACCTTCAATCACTTCCCCGTAGAATTTCACA
 
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JMFF038C14+           GGATATGAGATATCGTTTCTAGCAATCTCCCAAGGGTTGCCCATCTCAAGCCAATTTTCA
                      ____________________________________________________________
consensus             GGATATGAGATATCGTTTCTAGCAATCTCCCAAGGGTTGCCCATCTCAAGCCAATTTTCA
 
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JMFF038C14+           GCAACTTCCTCCTGACCATCTTTCGTTATAAGCTGTTTGAAAAGGCCGTATTTGTATCTA
                      ____________________________________________________________
consensus             GCAACTTCCTCCTGACCATCTTTCGTTATAAGCTGTTTGAAAAGGCCGTATTTGTATCTA
 
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JMFF038C14+           AGTCCATAACCCCATGCAGGGTAATTAAGTGTAGCCATTGAATCTAAGAAGCATGAGGCA
JMFS055G08+                                                          GAAGCATGAGGCA
                      ____________________________________________________________
consensus             AGTCCATAACCCCATGCAGGGTAATTAAGTGTAGCCATTGAATCTAAGAAGCATGAGGCA
 
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JMFF038C14+           AGCCGTCCTAATCCTCCATTCCCTAAAGCGGCATCTGGTTCCTGCTTAGCTACATCCTCT
JMFS055G08+           AGCCGTCCTAATCCTCCATTCCCTAAAGCGGCATCTGGTTCCTGCTTAGCTACATCCTCT
                      ____________________________________________________________
consensus             AGCCGTCCTAATCCTCCATTCCCTAAAGCGGCATCTGGTTCCTGCTTAGCTACATCCTCT
 
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JMFF038C14+           AGGTTGTGCCCGAGCTTTTTTAAAGCCTCTGCATAAGCTCCTGTTAGCTCCAAGTTACCA
JMFS055G08+           AGGTTGTGCCCGAGCTTTTTTAAAGCCTCTGCATAAGCTCCTGTTAGCTCCAAGTTACCA
                      ____________________________________________________________
consensus             AGGTTGTGCCCGAGCTTTTTTAAAGCCTCTGCATAAGCTCCTGTTAGCTCCAAGTTACCA
 
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JMFF038C14+           ATTGCATTGAGCAGTGCTCT                                        
JMFS055G08+           ATTGCATTGAGCAGTGCTCTACCCTGGAGAAATTCAATAGAAAGATAATAAGCCTGTTTT
                      ____________________________________________________________
consensus             ATTGCATTGAGCAGTGCTCTACCCTGGAGAAATTCAATAGAAAGATAATAAGCCTGTTTT
 
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JMFS055G08+           ACATTCATCTTCTCATAATAATCATATGTAGCATTCCAATTTATAATGAGCATATCACGA
                      ____________________________________________________________
consensus             ACATTCATCTTCTCATAATAATCATATGTAGCATTCCAATTTATAATGAGCATATCACGA
 
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JMFS055G08+           ACACTCCCTGCTGTTGCATTGAATGCCTTTGGAAGCTCAAACCGCTCGGGAGAAAATGAT
                      ____________________________________________________________
consensus             ACACTCCCTGCTGTTGCATTGAATGCCTTTGGAAGCTCAAACCGCTCGGGAGAAAATGAT
 
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JMFS055G08+           GGCGTGAACTCTGCATGGTATTTTATACTTGATGCAAGAGATGCTGAATCTGGTTGAAAA
                      ____________________________________________________________
consensus             GGCGTGAACTCTGCATGGTATTTTATACTTGATGCAAGAGATGCTGAATCTGGTTGAAAA
 
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JMFS055G08+           GCATCCAATGCCAGCCCTTCGTTATCAGATGAATAATCTTTAACTCTTTGTTGATGATCA
                      ____________________________________________________________
consensus             GCATCCAATGCCAGCCCTTCGTTATCAGATGAATAATCTTTAACTCTTTGTTGATGATCA
 
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JMFS055G08+           CTAGCAACATTGCTGATAAGTAGATTTCTTCTTCGCCAATGAATCAAATGGAACCCACCC
                      ____________________________________________________________
consensus             CTAGCAACATTGCTGATAAGTAGATTTCTTCTTCGCCAATGAATCAAATGGAACCCACCC
 
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JMFS055G08+           CTCCTTTTATTGGAGAAAAAGTTTGGGTTTTCACCCCTGAAGCCATTGAAACCAAGAATG
                      ____________________________________________________________
consensus             CTCCTTTTATTGGAGAAAAAGTTTGGGTTTTCACCCCTGAAGCCATTGAAACCAAGAATG
 
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JMFS055G08+           GTGCTTGTAATGGAGCTTGAATGTGAAATTGAGTTCACCCCAACCCAAGAAAATGCTGGA
                      ____________________________________________________________
consensus             GTGCTTGTAATGGAGCTTGAATGTGAAATTGAGTTCACCCCAACCCAAGAAAATGCTGGA