Contig 001923:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN014D02+                      CGATACGGGTTCAAACCTCCGGTTCGAACCGAACCGTGATCACCCCTAA
JMFS072A02+                                                                     AA
                      ____________________________________________________________
consensus                        CGATACGGGTTCAAACCTCCGGTTCGAACCGAACCGTGATCACCCCTAA
 
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JMFN014D02+           GTGGAGCAGATTGGGTCACCATTACAATTAATAAAAGTCACTCTTGTACATTGTCGAAAC
JMFS072A02+           GTGGAGCAGATTGGGTCACCATTACAATTAATAAAAGTCACTCTTGTACATTGTCGAAAC
                      ____________________________________________________________
consensus             GTGGAGCAGATTGGGTCACCATTACAATTAATAAAAGTCACTCTTGTACATTGTCGAAAC
 
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JMFN014D02+           ACATAAATCTTGCATTCTGCCAGTATATTGTTATTGTTTCAAGTAGAAGAAGAAATTATT
JMFS072A02+           ACATAAATCTTGCATTCTGCCAGTATATTGTTATTGTTTCAAGTAGAAGAAGAAATTATT
JMFS054F03+                                                           GAAGAAATTATT
                      ____________________________________________________________
consensus             ACATAAATCTTGCATTCTGCCAGTATATTGTTATTGTTTCAAGTAGAAGAAGAAATTATT
 
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JMFN014D02+           TGAAGATGGAAGATGATCGACCTGTAGGTGCCGGAATCGATTATAATGAGTGTGGCAACT
JMFS072A02+           TGAAGATGGAAGATGATCGACCTGTAGGTGCCGGAATCGATTATAATGAGTGTGGCAACT
JMFS054F03+           TGAAGATGGAAGATGATCGACCTGTAGGTGCCGGAATCGATTATAATGAGTGTGGCAACT
                      ____________________________________________________________
consensus             TGAAGATGGAAGATGATCGACCTGTAGGTGCCGGAATCGATTATAATGAGTGTGGCAACT
 
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JMFN014D02+           GGGCTGAAATCAGGAACGGCATCAATGGCCTTCTGGACACTGCTGAAGTTTGCACAACCA
JMFS072A02+           GGGCTGAAATCAGGAACGGCATCAATGGCCTTCTGGACACTGCTGAAGTTTGCACAACCA
JMFS054F03+           GGGCTGAAATCAGGAACGGCATCAATGGCCTTCTGGACACTGCTGAAGTTTGCACAACCA
                      ____________________________________________________________
consensus             GGGCTGAAATCAGGAACGGCATCAATGGCCTTCTGGACACTGCTGAAGTTTGCACAACCA
 
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JMFN014D02+           TTTAAATCCACGGTTATAACGCGTGAAACATTGTACATAGGAACGAGGGGAGAGTCCCAT
JMFS072A02+           TTTAAATCCACGGTTATAACGCGTGAAACATTGTACATAGGAACGAGGGGAGAGTCCCAT
JMFS054F03+           TTTAAATCCACGGTTATAACGCGTGAAACATTGTACATAGGAACGAGGGGAGAGTCCCAT
                      ____________________________________________________________
consensus             TTTAAATCCACGGTTATAACGCGTGAAACATTGTACATAGGAACGAGGGGAGAGTCCCAT
 
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JMFN014D02+           TTGGAGTCGTCGCACTTATTGGCCTTAGGCCTGCGTTTATGGTGGTGGTGGTGTTTGGAC
JMFS072A02+           TTGGAGTCGTCGCACTTATTGGCCTTAGGCCTGCGTTTATGGTGGTGGTGGTGTTTGGAC
JMFS054F03+           TTGGAGTCGTCGCACTTATTGGCCTTAGGCCTGCGTTTATGGTGGTGGTGGTGTTTGGAC
                      ____________________________________________________________
consensus             TTGGAGTCGTCGCACTTATTGGCCTTAGGCCTGCGTTTATGGTGGTGGTGGTGTTTGGAC
 
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JMFN014D02+           CGCGCCTGCTTAACTTGTTGGATAATAGAGAGGAAATCATCCAACGCAGTTTGTTTGACT
JMFS072A02+           CGCGCCTGCTTAACTTGTTGGATAATAGAGAGGAAATCATCCAACCCAGTTTGTTTGACT
JMFS054F03+           CGCGCCTGCTTAACTTGTTGGATAATAGAGAGGAAATCATCCAACCCAGTTTGTTTGACT
                      ____________________________________________________________
consensus             CGCGCCTGCTTAACTTGTTGGATAATAGAGAGGAAATCATCCAACCCAGTTTGTTTGACT
 
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JMFN014D02+           ACACTACCCAGAAAAGGTAGTAAGGTGGTAGGAGTATCGATGGTGAGGACAGTAGTAGTA
JMFS072A02+           ACACTACCCAGAAAAGGTAGTAAGGTGGTAGGAGTATCGATGGTGAGGACAGTAGTAGTA
JMFS054F03+           ACACTACCCAGAAAAGGTAGTAAGGTGGTAGGAGTATCGATGGTGAGGACAGTAGTAGTA
                      ____________________________________________________________
consensus             ACACTACCCAGAAAAGGTAGTAAGGTGGTAGGAGTATCGATGGTGAGGACAGTAGTAGTA
 
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JMFN014D02+           AGAAGGTCGGAATAGAGAGAAAAGGTGAGGGAAAAGAATGCAATGGTGAAGGCAATGAGC
JMFS072A02+           AGAAGGTCGGAATAGAGAGAAAAGGTGAGGGAAAAGAATGCAATGGTGAAGGCAATGAGC
JMFS054F03+           AGAAGGTCGGAATAGAGAGAAAAGGTGAGGGAAAAGAATGCAATGGTGAAGGCAATGAGC
                      ____________________________________________________________
consensus             AGAAGGTCGGAATAGAGAGAAAAGGTGAGGGAAAAGAATGCAATGGTGAAGGCAATGAGC
 
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JMFN014D02+           CAAAACAAAATGCGGGTTGATCTAGT                                  
JMFS072A02+           CAAAACAAAATGCGGGTTGATCTAGTGTTCATCATCATTCATGGCATGCAAGAGAGGAAA
JMFS054F03+           CAAAACAAAATGCGGGTTGATCTAGTGTTCATCATCATTCATGGCATGCAAGAGAGGAAA
                      ____________________________________________________________
consensus             CAAAACAAAATGCGGGTTGATCTAGTGTTCATCATCATTCATGGCATGCAAGAGAGGAAA
 
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JMFS072A02+           TGTT-AAAATGGGTTAGTTTAATTTGTGCTTTGCTGAGA                     
JMFS054F03+           TGTTGAAAATGGGTTAGTTTAATTTGTGCTTTGCTGAGAAGGGATGGGAGGAATAAATAA
                      ____________________________________________________________
consensus             TGTTGAAAATGGGTTAGTTTAATTTGTGCTTTGCTGAGAAGGGATGGGAGGAATAAATAA
 
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JMFS054F03+           TAATGGATGATTAGCTTAGGAGGTAAGCAAAATATATATAAATTAAAGCAGCACACTTTT
                      ____________________________________________________________
consensus             TAATGGATGATTAGCTTAGGAGGTAAGCAAAATATATATAAATTAAAGCAGCACACTTTT