Contig 001921:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN010O12+                                                             ATGCTTAATT
rJMFF025B06-                      GTTTTACTAGATAGATAAGCCTTGGAGCAAGCAGAAAAATGCTTAATT
                      ____________________________________________________________
consensus                         GTTTTACTAGATAGATAAGCCTTGGAGCAAGCAGAAAAATGCTTAATT
 
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JMFN010O12+           ACAGCTTATTTCGCCCTGTTTTCCTANTAGTATTGTTACAATAAAAAAGCACATAAAAGA
rJMFF025B06-          ACAGCTTATTTCGCCCTGTTTTCCTTATAGTATTGTTACAATAAAAAAGCACATAAAAGA
                      ____________________________________________________________
consensus             ACAGCTTATTTCGCCCTGTTTTCCTTATAGTATTGTTACAATAAAAAAGCACATAAAAGA
 
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JMFN010O12+           AAAACAGGAATTTATAATAATAAGTATAGTCTAATTTGGATAGGCATAGGCCATGTGAGT
rJMFF025B06-          AAAACAGGAATTTATAATAATAAGTATAGTCTAATTTGGATAGGCATAGGCCATGTGAGT
                      ____________________________________________________________
consensus             AAAACAGGAATTTATAATAATAAGTATAGTCTAATTTGGATAGGCATAGGCCATGTGAGT
 
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JMFN010O12+           GAGAATCGTTGAGGTATTGAAACCATTAAAGTTTGAACCGGCAGCTTTCGTGTACGCACC
rJMFF025B06-          GAGAATCGTTGAGGTATTGAAACCATTAAAGTTTGAACCGGCAGCTTTCGTGTACGCACC
                      ____________________________________________________________
consensus             GAGAATCGTTGAGGTATTGAAACCATTAAAGTTTGAACCGGCAGCTTTCGTGTACGCACC
 
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JMFN010O12+           CATGTTTGGAAACACCAGCCAGTCGTTGACTTGTAGTTCCGGTAGTTGGTAATCTCTCAA
rJMFF025B06-          CATGTTTGGAAACACCAGCCAGTCGTTGACTTGTAGTTCCGGTAGTTGGTAATCTCTCAA
                      ____________________________________________________________
consensus             CATGTTTGGAAACACCAGCCAGTCGTTGACTTGTAGTTCCGGTAGTTGGTAATCTCTCAA
 
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JMFN010O12+           CACCGTGTCAAGCGCGTCGCATGTGGGCCCAAACACCGTTGACGCGAACGTTTTCGACTC
rJMFF025B06-          CACCGTGTCAAGCGCGTCGCATGTGGGCCCAAACACCGTTGACGCGAACGTTTTCGACTC
                      ____________________________________________________________
consensus             CACCGTGTCAAGCGCGTCGCATGTGGGCCCAAACACCGTTGACGCGAACGTTTTCGACTC
 
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JMFN010O12+           TCGGCAAATAATACCCGGGGCCAGATTCGACGCGCACGCTAGGGGCGTGGCTGTCACAGT
rJMFF025B06-          TCGGCAAATAATACCCGGGGCCAGATTCGACGCGCACGCTAGGGGCGTGGCTGTCACAGT
                      ____________________________________________________________
consensus             TCGGCAAATAATACCCGGGGCCAGATTCGACGCGCACGCTAGGGGCGTGGCTGTCACAGT
 
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JMFN010O12+           TGCGTGATCGTATAGAATACAGTTCATTGAACCGTATAGCCCATCGTTGATCCAGTATTC
rJMFF025B06-          TGCGTGATCGTATAGAATACAGTTCATTGAACCGTATAGCCCATCGTTGATCCAGTATTC
                      ____________________________________________________________
consensus             TGCGTGATCGTATAGAATACAGTTCATTGAACCGTATAGCCCATCGTTGATCCAGTATTC
 
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JMFN010O12+           TCGGAGCTCGCCCCTCACGCGCTTCCCGATTATAGTGGCGGCCAACGTGAAAGGGGTTTC
rJMFF025B06-          TCGGAGCTCGCCCCTCACGCGCTTCCCGATTATAGTGGCGGCCAACGTGAAAGGGGTTTC
                      ____________________________________________________________
consensus             TCGGAGCTCGCCCCTCACGCGCTTCCCGATTATAGTGGCGGCCAACGTGAAAGGGGTTTC
 
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JMFN010O12+           CGCGAAGAACCGCCCCGGTTCAGCGATGATTGTCAGACCCGGTTCGTCGCCGAAGAACTC
rJMFF025B06-          CGCGAAGAACCGCCCCGGTTCAGCGATGATTGTCAGACCCGGTTCGTCGCCGAAGAACTC
                      ____________________________________________________________
consensus             CGCGAAGAACCGCCCCGGTTCAGCGATGATTGTCAGACCCGGTTCGTCGCCGAAGAACTC
 
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JMFN010O12+           CTGGACCGATTGGTTGACGGCCTCGACGGCGTCGTTAAATTGCTGTCCAGAGGTGAAGCC
rJMFF025B06-          CTGGACCGATTGGTTGACGGCCTCGACGGCGTCGTTAAATTGCTGTCCAGAGGTGAAGCC
JMFF025B06+                      GGTTGACGGCCTCGACGGCGTCGTTAAATTGCTGTCCAGAGGTGAAGCC
                      ____________________________________________________________
consensus             CTGGACCGATTGGTTGACGGCCTCGACGGCGTCGTTAAATTGCTGTCCAGAGGTGAAGCC
 
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JMFN010O12+           GCCGCCGATGTCGAGCACTTGCA                                     
rJMFF025B06-          GCCGCCGATGTCGAGCACTTGCAGTTTGGGCAAGCCGAGCCGAGTAGCCGTATCGAAAAC
JMFF025B06+           GCCGCCGATGTCGAGCACTTGCAGTTTGGGCAAGCCGAGCCGAGTAGCCGTATCGAAAAC
                      ____________________________________________________________
consensus             GCCGCCGATGTCGAGCACTTGCAGTTTGGGCAAGCCGAGCCGAGTAGCCGTATCGAAAAC
 
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rJMFF025B06-          GGCTCTAGCCGCGGCTATGG                                        
JMFF025B06+           GGCTCTAGCCGCGGCTATGGCTCCCCTGTACGCGCCGGCGTCCGCGTCTCCGCTGCCAAT
                      ____________________________________________________________
consensus             GGCTCTAGCCGCGGCTATGGCTCCCCTGTACGCGCCGGCGTCCGCGTCTCCGCTGCCAAT
 
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JMFF025B06+           GTGGAACGAAACGCCGGTGACATTAAGCCGCGCCGCCCGAGCCGCGAGCAGCAACGGCTC
                      ____________________________________________________________
consensus             GTGGAACGAAACGCCGGTGACATTAAGCCGCGCCGCCCGAGCCGCGAGCAGCAACGGCTC
 
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JMFF025B06+           CACCTCCTCCGGCAGCGCGCCGTATTTGGGACCCATCGGACACCGAGCATTGCCGTCGCG
JMFS054C01+                            CGCCGTATTTGGGACCCATCGGACACCGAGCATTGCCGTCGCG
JMFS054A02+                            CGCCGTATTTGGGACCCATCGGACACCGAGCATTGCCGTCGCG
                      ____________________________________________________________
consensus             CACCTCCTCCGGCAGCGCGCCGTATTTGGGACCCATCGGACACCGAGCATTGCCGTCGCG
 
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JMFF025B06+           GACCGGCTTGATCCGGAGGAGCAAATCGCACGTGGGGTGAAGCCTCTTAATCTTCTCGAC
JMFS054C01+           GACCGGCTTGATCCGGAGGAGCAAATCGCACGTGGGGTGAAGCCTCTTAATCTTCTCGAC
JMFS054A02+           GACCGGCTTGATCCGGAGGAGCAAATCGCACGTGGGGTGAAGCCTCTTAATCTTCTCGAC
                      ____________________________________________________________
consensus             GACCGGCTTGATCCGGAGGAGCAAATCGCACGTGGGGTGAAGCCTCTTAATCTTCTCGAC
 
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JMFF025B06+           CTCGTACTCCGAATCGAACGTCGTGATATTCACGCCGACATTAGCCGCGTAGACAACATC
JMFS054C01+           CTCGTACTCCGAATCGAACGTCGTGATATTCACGCCGACATTAGCCGCGTAGACAACATC
JMFS054A02+           CTCGTACTCCGAATCGAACGTCGTGATATTCACGCCGACATTAGCCGCGTAGACAACATC
                      ____________________________________________________________
consensus             CTCGTACTCCGAATCGAACGTCGTGATATTCACGCCGACATTAGCCGCGTAGACAACATC
 
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JMFF025B06+           GGCTTCCGGCTTGCACGGGTTAGCGAACACTATCCGATCAGGCGACACGCCGAGGGATAA
JMFS054C01+           GGCTTCCGGCTTGCACGGGTTAGCGAACACTATCCGATCAGGCGACACGCCGAGGGATAA
JMFS054A02+           GGCTTCCGGCTTGCACGGGTTAGCGAACACTATCCGATCAGGCGACACGCCGAGGGATAA
                      ____________________________________________________________
consensus             GGCTTCCGGCTTGCACGGGTTAGCGAACACTATCCGATCAGGCGACACGCCGAGGGATAA
 
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JMFF025B06+           AACGTAGTCGATTTCAGATCGGCTAGCGCAGTCGAAGTTGCAGTCCATGGCGGCTAGAAC
JMFS054C01+           AACGTAGTCGATTTCAGATCGGCTAGCGCAGTCGAAGTTGCAGTCCATGGCGGCTAGAAC
JMFS054A02+           AACGTAGTCGATTTCAGATCGGCTAGCGCAGTCGAAGTTGCAGTCCATGGCGGCTAGAAC
                      ____________________________________________________________
consensus             AACGTAGTCGATTTCAGATCGGCTAGCGCAGTCGAAGTTGCAGTCCATGGCGGCTAGAAC
 
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JMFF025B06+           CGTTAAAAACGA                                                
JMFS054C01+           CGTTAAAAACGACGGCTCGGGGTTACACTTAACGGCGTAGAAAGGACGGACGTTAGGGAA
JMFS054A02+           CGTTAAAAACGACGGCTCGGGGTTACACTTAACGGCGTAGAAAGGACGGACGTTAGGGAA
                      ____________________________________________________________
consensus             CGTTAAAAACGACGGCTCGGGGTTACACTTAACGGCGTAGAAAGGACGGACGTTAGGGAA
 
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JMFS054C01+           AGCGGTTGTCCATTTATCCATGAGACTCACAACCTCGCCCAAGTCCATCACGTAAAAGGG
JMFS054A02+           AGCGGTTGTCCATTTATCCATGAGACTCACAACCTCGCCCAAGTCCATCACGTAAAAGGG
                      ____________________________________________________________
consensus             AGCGGTTGTCCATTTATCCATGAGACTCACAACCTCGCCCAAGTCCATCACGTAAAAGGG
 
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JMFS054C01+           GTCTTTGGCCTCTTGCTTCTTCAAAACAATGGACTTAATGAAATCATTGAGAGCATCTTT
JMFS054A02+           GTCTTTGGCCTCTTGCTTCTTCAAAACAATGGACTTAATGAAATCATTGAGAGCATCTTT
                      ____________________________________________________________
consensus             GTCTTTGGCCTCTTGCTTCTTCAAAACAATGGACTTAATGAAATCATTGAGAGCATCTTT
 
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JMFS054C01+           TGAGAGGGGCACGAACCTTTTCCGGTCCTCCGCCGGCGCTCCGACGGTTGACCGGAGAAT
JMFS054A02+           TGAGAGGGGCACGAACCTTTTCCGGTCCTCCGCCGGCGCTCCGACGGTTGACCGGAGAAT
                      ____________________________________________________________
consensus             TGAGAGGGGCACGAACCTTTTCCGGTCCTCCGCCGGCGCTCCGACGGTTGACCGGAGAAT
 
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JMFS054C01+           GGCGGCGGGGTTCAAGCCGGAGACGATGATGGGCTGGCGCTCCATCAGACACAGAAAACA
JMFS054A02+           GGCGGCGGGGTTCAAGCCGGAGACGATGATGGGCTGGCGCTCCATCAGACACAGAAAACA
                      ____________________________________________________________
consensus             GGCGGCGGGGTTCAAGCCGGAGACGATGATGGGCTGGCGCTCCATCAGACACAGAAAACA