Contig 001919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS047F07Sequence617001919 (3)ref|XP_011086739.1|5e-78PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase 4 [Sesamum indicum]
JMFS109H11Sequence620001919 (3)ref|XP_011086739.1|3e-85PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase 4 [Sesamum indicum]
JMFS164H07Sequence595001919 (3)emb|CDP13307.1|4e-72unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS109H11+                       TTCTTCATCATTATTTTGGCAGCTGCCTGTGTACAGAGAAAAACACCG
JMFS164H07+                                                                     CG
JMFS047F07+                                                      TACAGAGAAAAACACCG
                      ____________________________________________________________
consensus                         TTCTTCATCATTATTTTGGCAGCTGCCTGTGTACAGAGAAAAACACCG
 
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JMFS109H11+           GTGAGATTCAGATCAATAACATCCTGCCATTGAGATTTAGACATCCTCATTAGCAAACCA
JMFS164H07+           GTGAGATTCAGATCAATAACATCCTGCCATTGAGATTTAGACATCCTCATTAGCAAACCA
JMFS047F07+           GTGAGATTCAGATCAATAACATCCTGCCATTGAGATTTAGACATCCTCATTAGCAAACCA
                      ____________________________________________________________
consensus             GTGAGATTCAGATCAATAACATCCTGCCATTGAGATTTAGACATCCTCATTAGCAAACCA
 
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JMFS109H11+           TCCTTAGTAATGCCTGCATTATTGATCAATATATCCACAGTTCCCCACGCATCGACTGCA
JMFS164H07+           TCCTTAGTAATGCCTGCATTATTGATCAATATATCCACAGTTCCCCACGCATCGACTGCA
JMFS047F07+           TCCTTAGTAATGCCTGCATTATTGATCAATATATCCACAGTTCCCCACGCATCGACTGCA
                      ____________________________________________________________
consensus             TCCTTAGTAATGCCTGCATTATTGATCAATATATCCACAGTTCCCCACGCATCGACTGCA
 
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JMFS109H11+           GTTTTCATCATTGATTCCACATCAGCCTCTTTCGAAACATCTCCACCAAAAGTAAGAGCC
JMFS164H07+           GTTTTCATCATTGATTCCACATCAGCCTCTTTCGAAACATCTCCACCAAAAGTAAGAGCC
JMFS047F07+           GTTTTCATCATTGATTCCACATCAGCCTCTTTCGAAACATCTCCACCAAAAGTAAGAGCC
                      ____________________________________________________________
consensus             GTTTTCATCATTGATTCCACATCAGCCTCTTTCGAAACATCTCCACCAAAAGTAAGAGCC
 
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JMFS109H11+           TGGCCACCACTTGCCTCGATCTCTTTGCAAACTTCTTCCGCCTCCTTTGAAGACCTTGCG
JMFS164H07+           TGGCCACCACTTGCCTCGATCTCTTTGCAAACTTCTTCCGCCTCCTTTGAAGACCTTGCG
JMFS047F07+           TGGCCACCACTTGCCTCGATCTCTTTGCAAACTTCTTCCGCCTCCTTTGAAGACCTTGCG
                      ____________________________________________________________
consensus             TGGCCACCACTTGCCTCGATCTCTTTGCAAACTTCTTCCGCCTCCTTTGAAGACCTTGCG
 
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JMFS109H11+           TAGTTAACCAAAACCTTACACCCTGCTTTCCCTAAAGCCAAGGCAATGGCTTTGCCAATT
JMFS164H07+           TAGTTAACCAAAACCTTACACCCTGCTTTCCCTAAAGCCAAGGCAATGGCTTTGCCAATT
JMFS047F07+           TAGTTAACCAAAACCTTACACCCTGCTTTCCCTAAAGCCAAGGCAATGGCTTTGCCAATT
                      ____________________________________________________________
consensus             TAGTTAACCAAAACCTTACACCCTGCTTTCCCTAAAGCCAAGGCAATGGCTTTGCCAATT
 
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JMFS109H11+           CCTCTAGAGGCTCCAGTGATAACAACTACAGGGGCTTCTACTTTTGGAGTCACTTCAGTA
JMFS164H07+           CCTCTAGAGGCTACAGTGATAACAACTACAGGGGCTTCTACTTTTGGAGTCACTTCAGTA
JMFS047F07+           CCTCTAGAGGCTCCAGTGATAACAACTACAGGGGCTTCTACTTTTGGAGTCACTTCAGTA
                      ____________________________________________________________
consensus             CCTCTAGAGGCTCCAGTGATAACAACTACAGGGGCTTCTACTTTTGGAGTCACTTCAGTA
 
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JMFS109H11+           CTTGCCTGTTCCACTGCAGCAACCTGAGCTTTAACACCATAGCGAGAGAAGGAGCTTTTG
JMFS164H07+           CTTGCCTGTTCCACTGCAGCAACCTGAGCTTTAACACCATAGCGAGAGAAGGAGCTTTTG
JMFS047F07+           CTTGCCTGTTCCACTGCAGCAACCTGAGCTTTAACACCATAGCGAGAGAAGGAGCTTTTG
                      ____________________________________________________________
consensus             CTTGCCTGTTCCACTGCAGCAACCTGAGCTTTAACACCATAGCGAGAGAAGGAGCTTTTG
 
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JMFS109H11+           GATCCACATTTCAAGGAAAACCCGGATCCACAGTGGAGCTTAAGCGGCGCGGAAGATTGG
JMFS164H07+           GATCCACATTTCAAGGAAAACCCGGATCCACAGTGGAGCTTAAGCGGCGCGGAAGATTGG
JMFS047F07+           GATCCACATTTCAAGGAAAACCCGGATCCACAGTGGAGCTTAAGCGGCGCGGAAGATTGG
                      ____________________________________________________________
consensus             GATCCACATTTCAAGGAAAACCCGGATCCACAGTGGAGCTTAAGCGGCGCGGAAGATTGG
 
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JMFS109H11+           CGCAGCTGAGTGAATTTATGGTGGCCGGAGAGTGAAGATTTATCGGAAATTCCGGTGTCC
JMFS164H07+           CGCAGCTGAGTGAATTTATGGTGGCCGGAGAGTGAAGATTTATCGGAAATTCCGGTGTCC
JMFS047F07+           CGCAGCTGAGTGAATTTATGGTGGCCGGAGAGTGAAGATTTATCGGAAATTCCGGTGTCC
                      ____________________________________________________________
consensus             CGCAGCTGAGTGAATTTATGGTGGCCGGAGAGTGAAGATTTATCGGAAATTCCGGTGTCC
 
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JMFS109H11+           CTGAAGGCAACGACGGCAGATCCTGCGGCAAA                            
JMFS164H07+           CTGAAGGCAACGACGGCAGATCCTGCGGCAAATGTAGCCATGCTCCTAGAAAA       
JMFS047F07+           CTGAAGGCAACGACGGCAGATCCTGCGGCAAATGTAGCCATGCTCCTAGAAAACAAAGAA
                      ____________________________________________________________
consensus             CTGAAGGCAACGACGGCAGATCCTGCGGCAAATGTAGCCATGCTCCTAGAAAACAAAGAA