Contig 001915:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS045G01Sequence612001915 (2)ref|XP_009768335.1|2e-58PREDICTED: uncharacterized protein LOC104219358 isoform X2 [Nicotiana sylvestri
JMFS157D11Sequence609001915 (2)ref|XP_004229294.1|206PREDICTED: uncharacterized protein LOC101246276 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS157D11+                                                               AAGCATTG
                      ____________________________________________________________
consensus                                                                 AAGCATTG
 
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JMFS157D11+           CATACAGGCCCAAGTCATGCAGGTATGGGGAAGACAGATGTTAGCAGACTTAACTTGTAG
                      ____________________________________________________________
consensus             CATACAGGCCCAAGTCATGCAGGTATGGGGAAGACAGATGTTAGCAGACTTAACTTGTAG
 
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JMFS157D11+           TAGTAGTAGTAGTAATGTAAAATGAGATGTCTCCCAGCATTGCCAGAACCCCAAACTACG
                      ____________________________________________________________
consensus             TAGTAGTAGTAGTAATGTAAAATGAGATGTCTCCCAGCATTGCCAGAACCCCAAACTACG
 
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JMFS157D11+           AGGGGAAGTTGATAATAAAAATTCAAGGTTGGAAATAAATTCAATATAAAACAAGATGTC
                      ____________________________________________________________
consensus             AGGGGAAGTTGATAATAAAAATTCAAGGTTGGAAATAAATTCAATATAAAACAAGATGTC
 
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JMFS157D11+           TAACAAAATAACAAATGAAGCTATTGCACCTTGTCAGTCGCACAGTTCCATCTTCACAAC
                      ____________________________________________________________
consensus             TAACAAAATAACAAATGAAGCTATTGCACCTTGTCAGTCGCACAGTTCCATCTTCACAAC
 
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JMFS157D11+           CTGTTGCAATCCAGCTAGATTCAGAAAAGTAACTCTGTTTCCCATTTGGACTGTATGATG
                      ____________________________________________________________
consensus             CTGTTGCAATCCAGCTAGATTCAGAAAAGTAACTCTGTTTCCCATTTGGACTGTATGATG
 
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JMFS157D11+           GATCCGGATGAATGAAACTTAAGGAATGTATCTCCCTCCCATGGAACTGCAAATGCAAAT
                      ____________________________________________________________
consensus             GATCCGGATGAATGAAACTTAAGGAATGTATCTCCCTCCCATGGAACTGCAAATGCAAAT
 
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JMFS157D11+           TTTTTGGGTACATCTCCCTGTCATTCTCTTCCACCCAGTACCTATGAATATAAATGATTC
JMFS045G01+                                                           TATAAATGATTC
                      ____________________________________________________________
consensus             TTTTTGGGTACATCTCCCTGTCATTCTCTTCCACCCAGTACCTATGAATATAAATGATTC
 
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JMFS157D11+           CATCCTTCACAAATGCAAAGCAATTCTTCATCTCAGGAGAACGACCAAGATAATATGAAT
JMFS045G01+           CATCCTTCACAAATGCAAAGCAATTCTTCATCTCAGGAGAACGACCAAGATAATATGAAT
                      ____________________________________________________________
consensus             CATCCTTCACAAATGCAAAGCAATTCTTCATCTCAGGAGAACGACCAAGATAATATGAAT
 
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JMFS157D11+           GAGGACGTCGCCATCCACCGCATAATATTTGTACAACCTTTCTTTCAGAACTTAAATTCC
JMFS045G01+           GAGGACGTCGCCATCCACCGCATAATATTTGTACAACCTTTCTTTCAGAACTTAAATTCC
                      ____________________________________________________________
consensus             GAGGACGTCGCCATCCACCGCATAATATTTGTACAACCTTTCTTTCAGAACTTAAATTCC
 
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JMFS157D11+           ATATTATAAACTCTGACGATGTAAAACCTATAGCATAGCTACCACTTGGCAATTTGTCAT
JMFS045G01+           ATATTATAAACTCTGACGATGTAAAACCTATAGCATAGCTACCACTTGGCAATTTGTCAT
                      ____________________________________________________________
consensus             ATATTATAAACTCTGACGATGTAAAACCTATAGCATAGCTACCACTTGGCAATTTGTCAT
 
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JMFS157D11+           T                                                           
JMFS045G01+           TGTAGTCAGCATTGGAGTAGACTGATTGTACAGTGCTTAGTTCTTTCACTTGCTTGATTC
                      ____________________________________________________________
consensus             TGTAGTCAGCATTGGAGTAGACTGATTGTACAGTGCTTAGTTCTTTCACTTGCTTGATTC
 
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JMFS045G01+           CTGTGAATTCTAAATTCTTTTGATTTCTATCATATTCAAAGTAGCATATGCATCCATCTC
                      ____________________________________________________________
consensus             CTGTGAATTCTAAATTCTTTTGATTTCTATCATATTCAAAGTAGCATATGCATCCATCTC
 
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JMFS045G01+           CTCCAGTCTGAAATTTTTTTAAAAATACAGATAACAAAATAGTGAATATAGAATGAACAA
                      ____________________________________________________________
consensus             CTCCAGTCTGAAATTTTTTTAAAAATACAGATAACAAAATAGTGAATATAGAATGAACAA
 
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JMFS045G01+           ATATTCTTTTAGTGATATACAAAGCTATTTATAATCACAGGTGAAGTGAAGGCAGGAGAG
                      ____________________________________________________________
consensus             ATATTCTTTTAGTGATATACAAAGCTATTTATAATCACAGGTGAAGTGAAGGCAGGAGAG
 
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JMFS045G01+           GAATCTCAAATAAGAGGGCCATACAGAATGTATATCAAGTTGACTTGGACCAGAGCCAAC
                      ____________________________________________________________
consensus             GAATCTCAAATAAGAGGGCCATACAGAATGTATATCAAGTTGACTTGGACCAGAGCCAAC
 
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JMFS045G01+           AATTGAAACACTACAAACTGTTGATATTCCATGAGCTCCTTTGAAAAAAGCCAGTGGAGA
                      ____________________________________________________________
consensus             AATTGAAACACTACAAACTGTTGATATTCCATGAGCTCCTTTGAAAAAAGCCAGTGGAGA
 
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JMFS045G01+           TACATTCTCTTCTAAAGTTATAGGTGAGTTATATAGTAGATTCTTTTTCAAAGGAAACAG
                      ____________________________________________________________
consensus             TACATTCTCTTCTAAAGTTATAGGTGAGTTATATAGTAGATTCTTTTTCAAAGGAAACAG